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SCNpilot_cont_300_bf_scaffold_1542_curated

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1542_curated_1
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..665
DNA (663bp) protein (221aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Methyloferula stellata RepID=UPI0003740BDA
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:KGD96967.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
sulfide-quinone reductase
SCNpilot_cont_300_bf_scaffold_1542_curated_2
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

696..899
DNA (204bp) protein (68aa)
sulfurtransferase n=1 Tax=Martelella mediterranea RepID=UPI00036DD547
Sulfurtransferase {ECO:0000313|EMBL:KGD96968.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1542_curated_3
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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966..1979
DNA (1014bp) protein (338aa)
Membrane fusion protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0AZW8_9RHIZ
membrane fusion protein
Membrane fusion protein {ECO:0000313|EMBL:AGK56744.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_300_bf_scaffold_1542_curated_4
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1976..5182
DNA (3207bp) protein (1069aa)
Acriflavin resistance protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B1B0_9RHIZ
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:AGK56743.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_300_bf_scaffold_1542_curated_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5390..6187)
DNA (798bp) protein (266aa)
UspA n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIU6_NITHX
hypothetical protein
UspA {ECO:0000313|EMBL:ABE63851.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_1542_curated_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6414..7934)
DNA (1521bp) protein (507aa)
Peptidoglycan transpeptidase, ErfK-YbiS-YhnG family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QGK6_NITHX
hypothetical protein
Peptidoglycan transpeptidase, ErfK-YbiS-YhnG family {ECO:0000313|EMBL:ABE64641.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_1542_curated_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8889..9743
DNA (855bp) protein (285aa)
RNA methyltransferase TrmH, group 3; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
RNA methyltransferase TrmH, group 3 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKF5_NITHX
RNA methyltransferase TrmH, group 3 {ECO:0000313|EMBL:ABE63292.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_1542_curated_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9913..10455)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKF4_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63293.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_1542_curated_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10496..10981)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKF3_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63294.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_1542_curated_10
unknown

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comp(11148..11279)
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1542_curated_11
unknown

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comp(11418..11597)
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1542_curated_12
unknown

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comp(11687..11872)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1542_curated_13
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12738..13445
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YAQ2_MESOW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH88812.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_300_bf_scaffold_1542_curated_14
unknown

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comp(13901..14935)
DNA (1035bp) protein (345aa)
AraC family transcriptional regulator n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B56F92
Helix-turn-helix domain-containing protein AraC type {ECO:0000313|EMBL:CPR18095.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
AraC family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1542_curated_15
Mesorhizobium sp. LNJC405B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15078..15404
DNA (327bp) protein (109aa)
Uncharacterized protein n=2 Tax=Mesorhizobium RepID=V7GIG7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX94576.1}; TaxID=1287281 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC405B00.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1542_curated_16
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15450..15725
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PDJ6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39636.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1542_curated_17
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15852..16610
DNA (759bp) protein (253aa)
Membrane protein n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HDJ0_9RHIZ
Membrane protein {ECO:0000313|EMBL:ESZ54758.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
Conserved membrane protein of unknown function
SCNpilot_cont_300_bf_scaffold_1542_curated_18
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17519..18901)
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAX6_PELHB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ53612.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCNpilot_cont_300_bf_scaffold_1542_curated_19
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18987..20423)
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAX7_PELHB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ53613.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCNpilot_cont_300_bf_scaffold_1542_curated_20
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(20487..21023)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TYK7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP62636.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
hypothetical protein
Displaying 20 items

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