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SCNpilot_cont_300_bf_scaffold_17160_curated_7

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: comp(4285..4491)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L30 n=2 Tax=Oligotropha carboxidovorans RepID=B6JEY3_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 68.0
  • Bit_score: 113
  • Evalue 1.20e-22
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 similarity KEGG
DB: KEGG
  • Identity: 82.4
  • Coverage: 68.0
  • Bit_score: 113
  • Evalue 3.80e-23
50S ribosomal protein L30 {ECO:0000313|EMBL:AEI07012.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 68.0
  • Bit_score: 113
  • Evalue 1.70e-22

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Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 207
ATGGCCAAGACTGCGAATAAGGCCGCAAAGACGATCAAGGTCGAGCAGACCGGCAGCGCGATCCGCCGCCAGCACGCGCAGCGTTCGACGCTGATCGGGCTCAGGCTCAACAAGATCGGCCGGATCTCCGAGTTGCAGGACACGCCTGAGGTTCGCGGCATGATCGCGAAGGTTCAGCACATCGTCAGGGTGATCGACGAGAAGTAA
PROTEIN sequence
Length: 69
MAKTANKAAKTIKVEQTGSAIRRQHAQRSTLIGLRLNKIGRISELQDTPEVRGMIAKVQHIVRVIDEK*