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SCNpilot_cont_300_bf_scaffold_17160_curated_8

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: comp(4562..5110)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S5 n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000347A542 similarity UNIREF
DB: UNIREF100
  • Identity: 97.3
  • Coverage: 182.0
  • Bit_score: 350
  • Evalue 9.10e-94
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 similarity KEGG
DB: KEGG
  • Identity: 97.3
  • Coverage: 182.0
  • Bit_score: 350
  • Evalue 3.80e-94
30S ribosomal protein S5 {ECO:0000255|HAMAP-Rule:MF_01307}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 182.0
  • Bit_score: 350
  • Evalue 1.70e-93

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
CGCGAACGGAGCAGGGATCGCGAGGAGCGCGACAGCGAGTTCGTCGACAAGCTCGTCCACATCAACCGTGTGGCGAAGGTCGTCAAGGGCGGCAAGCGGTTCGGTTTCGCGGCGCTGGTCGTGATCGGCGACCAGAAGGGCCGCGTCGGCTTCGGTCACGGCAAGGCTCGCGAAGTGCCGGAGGCGATCCGCAAGGCGACGGAATCGGCCAAGCGCAATCTGACGCGCGTGGCGCTGCGCGAGGGCCGGACGCTGCATCACGACATCGCAGGTCGTCACGGCGCAGGCCGCGTTTATCTGCGCGCCGCGCCGGCCGGCACCGGGATCATCGCCGGCGGTCCGATGCGCGCCGTGTTCGAGACGCTCGGCATCCAGGACGTGGTTGCGAAGTCGGTCGGCTCATCCAACCCCTACAACATGGTTCGCGCGACCTTCGACGCGCTGAAGCATTTGGATTCGCCGCGTTCGGTCGCCGCCCGCCGCAACATCAAGGTATCCACGCTGCAGGCGCGCCGCGTCGGCGGCGACGTCGAAGCGGTTGCCGAATAA
PROTEIN sequence
Length: 183
RERSRDREERDSEFVDKLVHINRVAKVVKGGKRFGFAALVVIGDQKGRVGFGHGKAREVPEAIRKATESAKRNLTRVALREGRTLHHDIAGRHGAGRVYLRAAPAGTGIIAGGPMRAVFETLGIQDVVAKSVGSSNPYNMVRATFDALKHLDSPRSVAARRNIKVSTLQARRVGGDVEAVAE*