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SCNpilot_cont_300_bf_scaffold_3357_curated_1

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: comp(3..665)

Top 3 Functional Annotations

Value Algorithm Source
rbcL; ribulose bisophosphate carboxylase (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] similarity KEGG
DB: KEGG
  • Identity: 97.7
  • Coverage: 221.0
  • Bit_score: 457
  • Evalue 2.60e-126
Ribulose bisphosphate carboxylase large chain {ECO:0000255|HAMAP-Rule:MF_01338}; Short=RuBisCO large subunit {ECO:0000255|HAMAP-Rule:MF_01338};; EC=4.1.1.39 {ECO:0000255|HAMAP-Rule:MF_01338};; TaxID=29421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter vulgaris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 221.0
  • Bit_score: 457
  • Evalue 1.20e-125
Ribulose bisphosphate carboxylase large chain 3 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=RBL1C_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 221.0
  • Bit_score: 457
  • Evalue 8.40e-126
  • rbh

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Taxonomy

Nitrobacter vulgaris → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 663
ATGGCAGTCAAAACCTACCAGGCCGGCGTCACGGAATATCGGCAAAGCTACTGGCAGCCGGATTACGCGCCTCTCGACACCGATATCTTGGCTTGTTTCAAGATCACGCCGCAGCCCGGGGTGGATCGCGAAGAGGCGGCCGCGGCGGTCGCCGCCGAGTCGTCCTGCGGCACCTGGACCACGGTGTGGACCGATCTGCTGACCGACCTCGACTACTACAAGGGACGCGCCTATCGCCTCGAGGACGTGCCGGGCGATGATACGTGCTTTTACGCTTTCATTGCCTATCCCATCGACCTTTTCGAGGAAGGCTCGGTCGTCAACGTGTTCACCTCGCTGGTGGGCAACGTGTTCGGGTTCAAGGCTGTCCGCGCGCTGCGCCTGGAGGATCTGCGCTTCCCCATCGCTTACGTGAAGACCTGCGGTGGCCCGCCCCACGGCATTCAGGTCGAGCGCGACAAGCTCAACAAATATGGCCGTCCGCTGCTGGGCTGCACCATCAAGCCCAAGCTCGGCCTGTCCGCCAAGAACTACGGCCGCGCCTGCTACGAAGCCCTGCGTGGTGGTCTGGACTTCACCAAGGACGACGAGAACATCAACAGCCAGCCGTTCATGCGCTGGCGCGACCGTTTTGATTTCGTGATGGAGGCGGTCCAGAAAGCC
PROTEIN sequence
Length: 221
MAVKTYQAGVTEYRQSYWQPDYAPLDTDILACFKITPQPGVDREEAAAAVAAESSCGTWTTVWTDLLTDLDYYKGRAYRLEDVPGDDTCFYAFIAYPIDLFEEGSVVNVFTSLVGNVFGFKAVRALRLEDLRFPIAYVKTCGGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRACYEALRGGLDFTKDDENINSQPFMRWRDRFDFVMEAVQKA