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SCNpilot_cont_300_bf_scaffold_3357_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3357_curated_1
Nitrobacter vulgaris, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..665)
DNA (663bp) protein (221aa)
rbcL; ribulose bisophosphate carboxylase (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
Ribulose bisphosphate carboxylase large chain {ECO:0000255|HAMAP-Rule:MF_01338}; Short=RuBisCO large subunit {ECO:0000255|HAMAP-Rule:MF_01338};; EC=4.1.1.39 {ECO:0000255|HAMAP-Rule:MF_01338};; TaxID=29421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter vulgaris.;"
Ribulose bisphosphate carboxylase large chain 3 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=RBL1C_NITHX rbh
SCNpilot_cont_300_bf_scaffold_3357_curated_2
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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897..1829
DNA (933bp) protein (311aa)
Transcriptional regulatory protein, LysR family n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SR44_NITWN
LysR family transcriptional regulator
Transcriptional regulatory protein, LysR family {ECO:0000313|EMBL:ABA05247.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_300_bf_scaffold_3357_curated_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1819..2145)
DNA (327bp) protein (109aa)
Nitrogen regulatory protein P-II (GlnB, GlnK) n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFS2_NITHX
nitrogen regulatory protein P-II (GlnB, GlnK)
Nitrogen regulatory protein P-II (GlnB, GlnK) {ECO:0000313|EMBL:ABE64925.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_3357_curated_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2142..5255)
DNA (3114bp) protein (1038aa)
UPF0753 protein Nham_4323 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Y4323_NITHX rbh
UPF0753 protein Nham_4323 {ECO:0000255|HAMAP-Rule:MF_01871}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
hypothetical protein; K09822 hypothetical protein
SCNpilot_cont_300_bf_scaffold_3357_curated_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5240..6001)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFS4_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64923.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_3357_curated_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6008..7705)
DNA (1698bp) protein (566aa)
NADH/ubiquinone/plastoquinone (complex I); K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3]
NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFS9_NITHX
NADH/Ubiquinone/plastoquinone (Complex I) {ECO:0000313|EMBL:ABE64918.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_3357_curated_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7918..8214
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFT0_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64917.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_3357_curated_8
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8570..8749
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WUX9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ36235.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3357_curated_9
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8875..9303)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WVX8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ35861.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3357_curated_10
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9607..10092)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X077_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ34359.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3357_curated_11
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10178..10984)
DNA (807bp) protein (269aa)
TonB like protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X083_9BRAD
TonB like protein {ECO:0000313|EMBL:EAQ34358.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
TonB-like protein; K03832 periplasmic protein TonB
SCNpilot_cont_300_bf_scaffold_3357_curated_12
unknown

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comp(11138..11254)
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3357_curated_13
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11267..11728)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WZH0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ34620.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3357_curated_14
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11791..12132)
DNA (342bp) protein (114aa)
Invasion associated locus B n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SUR9_NITWN
invasion associated locus B
Invasion associated locus B {ECO:0000313|EMBL:ABA03972.1}; Flags: Precursor;; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
Displaying 14 items

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