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SCNpilot_cont_300_bf_scaffold_2004_curated_1

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: comp(3..365)

Top 3 Functional Annotations

Value Algorithm Source
Transcription activator, effector binding protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHJ2_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 86.8
  • Coverage: 121.0
  • Bit_score: 215
  • Evalue 3.00e-53
transcription activator, effector binding similarity KEGG
DB: KEGG
  • Identity: 86.8
  • Coverage: 121.0
  • Bit_score: 215
  • Evalue 9.60e-54
Transcription activator, effector binding protein {ECO:0000313|EMBL:ABE64305.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.8
  • Coverage: 121.0
  • Bit_score: 215
  • Evalue 4.30e-53

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 363
ATGAATCGCCCCCGCCTTTTTCGCCGCCTCGCGATCGCGATGATCCCGGCGGCCATGTCCCTGGGGCTCTCCGCGGTACTTGCCCAAACCCCGCCCGCGACGCCTCCCGGCGCGACGGCACCGCCTGCGACCCCGGCCCCGCCGGCTGCGCCCGCCCCGCCCGGAACAGCAACTCCGACGACGCCGGCTCCCCCGCCGGCCGAAGTCCAGACCCCGGCAAACCCCACCGCAGAGGCGCCGAAGCCGCCGGCCACGGCCCCCGTGCACACCGCCGATCCCTTCGGCGAGGAATTCACGCTGACACCGAAGACAGTCCTGACCTTGCGAAACACCGCCACCTGGGACACCGCGTTCGAGACGCTG
PROTEIN sequence
Length: 121
MNRPRLFRRLAIAMIPAAMSLGLSAVLAQTPPATPPGATAPPATPAPPAAPAPPGTATPTTPAPPPAEVQTPANPTAEAPKPPATAPVHTADPFGEEFTLTPKTVLTLRNTATWDTAFETL