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SCNpilot_cont_300_bf_scaffold_2004_curated_2

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: 632..1516

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.3
  • Coverage: 290.0
  • Bit_score: 532
  • Evalue 3.80e-148
dapF; diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7] similarity KEGG
DB: KEGG
  • Identity: 86.6
  • Coverage: 290.0
  • Bit_score: 523
  • Evalue 4.00e-146
Diaminopimelate epimerase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WTJ1_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 89.3
  • Coverage: 290.0
  • Bit_score: 532
  • Evalue 2.70e-148

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Taxonomy

Nitrobacter sp. Nb-311A → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGGATGCCAGGATGGGCGCGCTCGCAAACCACGCTTTCAGCAAGATGAACGGCATCGGCAACGAGATCGTCGTGGTCGATCTGCGCGACAGTGCCGCCACGGTGACGGCCGAGGAGGCACGCGCGATCGCCTCGCCGGCCGGCGTTCCCTATGATCAGTTGATGGTCCTGCAACCCCCGCGGACGCCACGCACGGAGGCCTTCGTTCGAATCTACAATAACGACGGTTCGGAGGCGAACGCTTGCGGCAATGGCATGCGTTGCGTGGCGCGGCAGGTGTTCGAAGCCACGGGCAAGACCGTGCTGACTTTCGAGACCCGTGCCGGGCTGTTGAATTGCTGGCGAGGCTCCACGCGCGGTTTCTACACCGTCGACATGGGGCTACCAAAATTCGATTGGCGGGATATCCCGCTCGCCGAGGAATTCCGCGACACCCGCTATATCGAATTGCAGGTCGGGCCGATCGAAAAGCCGGTGCTGCATTCGCCGTCGGTGGTCAGCATGGGCAATCCGCACGCCATCTTCTGGGTCGATGACGTGAATGCTTATGACCTTGAACGCTTCGGGCCACTATTGGAGAATCATCCGATCTTTCCCGAGCGTGCCAACATCACGCTGGCGCATATCGTCGATCGCGATCACATCGTGATGCGGACCTGGGAGCGCGGCGTGGGCCTGACCAAGGCCTGCGGTTCGGCGGCCTGCGCGACGGCAGTGGCGGCGGCGCGGCTCAAACGGACCAACCGCACGGTCGAGATGATGCTGCCCGGCGGCAATCTGACCATCGAGTGGTGCGAGCACGGCGATCATGTGATGATGACCGGTCCGGCCGTGTTCGAATATGCCGGTACGTTCGATCCCGCATTGTTCGCCTCTGTCGCGTGA
PROTEIN sequence
Length: 295
MDARMGALANHAFSKMNGIGNEIVVVDLRDSAATVTAEEARAIASPAGVPYDQLMVLQPPRTPRTEAFVRIYNNDGSEANACGNGMRCVARQVFEATGKTVLTFETRAGLLNCWRGSTRGFYTVDMGLPKFDWRDIPLAEEFRDTRYIELQVGPIEKPVLHSPSVVSMGNPHAIFWVDDVNAYDLERFGPLLENHPIFPERANITLAHIVDRDHIVMRTWERGVGLTKACGSAACATAVAAARLKRTNRTVEMMLPGGNLTIEWCEHGDHVMMTGPAVFEYAGTFDPALFASVA*