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SCNpilot_cont_300_bf_scaffold_1902_curated_2

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: 1121..2311

Top 3 Functional Annotations

Value Algorithm Source
ribonuclease D; K03684 ribonuclease D [EC:3.1.13.5] similarity KEGG
DB: KEGG
  • Identity: 93.7
  • Coverage: 396.0
  • Bit_score: 744
  • Evalue 1.50e-212
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 394.0
  • Bit_score: 739
  • Evalue 2.10e-210
Ribonuclease D n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X1L0_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 394.0
  • Bit_score: 739
  • Evalue 1.50e-210

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Taxonomy

Nitrobacter sp. Nb-311A → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1191
ATGCGGGGCGACAAGGGCAAAAAGACGGGCTATGGAGCGCTCATGGACCTTATCACGACCAGCGCGGGATTGGCATCCGTCTGCGCCCGCCTCGCCGGCCATCCTGTCATCACGGTCGATACGGAGTTTCTCCGCGAGACCACCTATTACCCCCTGCTTTGCGTGCTCCAGATGGCGAGCCCCGACGAAGCCGTGGTGGTCGACGCGCTCTCCGAGGGGATCGACCTGAAGCCCTTTTTCGAGCTGATGTCGAACGAGCGCGTGCTGAAGGTATTCCACGCCGCCCGTCAGGACATCGAAATCGTCTGGCACCAGGCCGGTATCATTCCCCACCCGATCTTCGACACGCAAGTGGCCGCCATGGTTCTGGGCTACGGCGACTCCATCGCTTATGACGCACTGGTCGAGCGCGTCACCGGCCACCGGCCGGACAAGACCCATCGCTTCACGGACTGGTCGCGCCGGCCGCTGACCAGGGACCAGCTCGAATATGCGGTGGCGGACGTCACCCATCTCCGTGACGTCTTCGCCGCCCTCGACGCCGACCTCAAGAAGCGCGGCCGCAGCGATTGGGTCAGCGAGGAGATGGAAGTCCTGACCTCGCCGAAAACCTATGATTTCCATCCCGAACGCGCATGGGAGCGGCTGAAGACGCGGGTTCGCAAGCCGAAGGATCTCGCTGTGCTGATGGAAGTGGCGGCCTGGCGCGAACAGGAAGCCCAGAGCCGGAACGTGCCGCGATCCCGAGTCCTGAAAGACGACGCAGTCGGCGATATCGTGACCCATGCGCCCGCCAGCCCGGAGCGGCTGGCGGCGCTGCGCTCGCTGCCGAAAGGCTTCGAAAAATCGCAATGGGGAGCCGACATCGTCGCGGCCGTCCAGCGCGGTCTCGCCCGAGACCCGCATACGCTCCCGAAGATGGAAAAGCCGCGCAACAACTCCAACGGAGCCGCCACCGTGGAGCTTCTCAAGGTTCTGCTTCGGATGACATCCGAGCGCCACGCCGTCGCCAGCAAGGTGATCGCCACCGTGGACGACCTGGAGCGGATCGCGGCGGACGACGAAGCCGATGTCGGGGCGCTGCACGGCTGGCGGCGCGAATTGTTCGGCGAAGCCGCGCTCGCCCTGAAGCATGGCCGGCTGGCATTGGCGATCGAAAAGGGCCGCGTGGTGCGCGTGGAGCGAGGCTGA
PROTEIN sequence
Length: 397
MRGDKGKKTGYGALMDLITTSAGLASVCARLAGHPVITVDTEFLRETTYYPLLCVLQMASPDEAVVVDALSEGIDLKPFFELMSNERVLKVFHAARQDIEIVWHQAGIIPHPIFDTQVAAMVLGYGDSIAYDALVERVTGHRPDKTHRFTDWSRRPLTRDQLEYAVADVTHLRDVFAALDADLKKRGRSDWVSEEMEVLTSPKTYDFHPERAWERLKTRVRKPKDLAVLMEVAAWREQEAQSRNVPRSRVLKDDAVGDIVTHAPASPERLAALRSLPKGFEKSQWGADIVAAVQRGLARDPHTLPKMEKPRNNSNGAATVELLKVLLRMTSERHAVASKVIATVDDLERIAADDEADVGALHGWRRELFGEAALALKHGRLALAIEKGRVVRVERG*