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SCNpilot_cont_300_bf_scaffold_1902_curated_10

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: comp(10257..10460)

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding domain protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VDN1_RHOPX similarity UNIREF
DB: UNIREF100
  • Identity: 91.0
  • Coverage: 67.0
  • Bit_score: 132
  • Evalue 1.90e-28
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 91.0
  • Coverage: 67.0
  • Bit_score: 132
  • Evalue 6.00e-29
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ADU43965.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.0
  • Coverage: 67.0
  • Bit_score: 132
  • Evalue 2.70e-28

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGCAGAAGGGCACCGTCAAATGGTTCAATCCGACCAAGGGGTACGGGTTCATCAAGCCGGCGACCGGCGACAAGGACGTCTTCGTTCACATCTCAGCCGTGGAGCGCGCTGGCCTCAGCACACTCAATGAGGATCAGGCTGTCGAATACGACCTGGTTGAAAATCGCGGCAAGACCTCCGCTGAAAATCTGAAGGTCTCATAA
PROTEIN sequence
Length: 68
MQKGTVKWFNPTKGYGFIKPATGDKDVFVHISAVERAGLSTLNEDQAVEYDLVENRGKTSAENLKVS*