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SCNpilot_cont_300_bf_scaffold_1902_curated_23

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: comp(22461..23069)

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding protein family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLF9_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 202.0
  • Bit_score: 401
  • Evalue 3.80e-109
cold-shock DNA-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 94.6
  • Coverage: 202.0
  • Bit_score: 401
  • Evalue 1.20e-109
Cold-shock DNA-binding protein family {ECO:0000313|EMBL:ABE62938.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 202.0
  • Bit_score: 401
  • Evalue 5.40e-109

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 609
GTGAGCGATCACCTTGGATCGAAGGACTTTTCTGGAACCACGGATCGGGAGTCAGGGGTCGGTCCGTTTACGGGGCTTGGCGAATCCCCTGCCAACATTGTCGAGATCAGTGGCGTCATCAAATGGTTTGACGCTTCAAAGGGCTACGGTTTCATCGTTCCCGATAACGGCTCGCCGGACGTGCTCCTGCATGTCACTGTGCTTCGTCGTGACGGTTACCAGACGGCCTATGAAGGATCCCGTCTGGTTTGTGAATGCGTGCAGCGGGCGAAGGGCTATCAGGCGTTCCGGATTACGTCCATGGACGAATCCACGGCCATTCATCCGGCGCAGATGCTTCCGCCTCGGACCCACGTCAGCGTGACGCCGACCAGCGGTCTGGAGCGGGCGCAGGTGAAATGGTTCAACCGGCTGCGCGGCTTCGGGTTCTTGACGTGCGGCGAGGGGACGCCCGATATCTTCGTCCACATGGAAACGCTGCGGCGCTTCGGCATGACGGAGCTTCGGCCGGGGCAGTTCGTTCTGGTCCGGTTCGGGCCGGGTTCCAAGGGAATGATGGCGGCGGAAGTTCAACCGGAAACCGGGGCTCCGGGCCTGTCCTCGCATTGA
PROTEIN sequence
Length: 203
VSDHLGSKDFSGTTDRESGVGPFTGLGESPANIVEISGVIKWFDASKGYGFIVPDNGSPDVLLHVTVLRRDGYQTAYEGSRLVCECVQRAKGYQAFRITSMDESTAIHPAQMLPPRTHVSVTPTSGLERAQVKWFNRLRGFGFLTCGEGTPDIFVHMETLRRFGMTELRPGQFVLVRFGPGSKGMMAAEVQPETGAPGLSSH*