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SCNpilot_cont_300_bf_scaffold_1318_curated_6

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: comp(4346..6457)

Top 3 Functional Annotations

Value Algorithm Source
TonB-denpendent receptor n=1 Tax=Pseudomonas psychrophila RepID=UPI0002FE1AA0 similarity UNIREF
DB: UNIREF100
  • Identity: 44.9
  • Coverage: 715.0
  • Bit_score: 636
  • Evalue 2.50e-179
TonB-denpendent receptor {ECO:0000313|EMBL:ERH56793.1}; TaxID=1390371 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens EGD-AQ6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.0
  • Coverage: 706.0
  • Bit_score: 635
  • Evalue 1.00e-178
ferric alcaligin siderophore receptor; K02014 iron complex outermembrane recepter protein similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 706.0
  • Bit_score: 631
  • Evalue 4.20e-178

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2112
GTGCAAGGACGGCCCACCAGCGATCCCGGCGCCACCGAGGGATCGGGTTCCTACACCACCACGCAGATGAGCTCGTCGACCGGTCTGCCGTTGTCGATCCGCGAAACGCCGCAGTCGGTCTCGGTGATTTCGCGGCAGCGCATGGACGACCAGAACATCCGCACCTTCAAGGATGCGATGGAGAATGCCACCGGCATCACCTCGCAAAGCTGGGACAATGACCGCGTCGAATTCATGTCGCGCGGCTTCAAGCTGGCCGAATTCCGCTACGACGGCGTGCCGGTCGATGTGGACGGTGCGGGGGATCATGGCCTGTCGACTGTCGACATGGCCATCTATGACCGGGTGGAAGTCACCAAGGGCGCCAGCGGTTTGCTGCAGGGCGCGGGCAGTCCCGGCGCGGCCGTCAATCTCGTCCGCAAGCGGCCGACCAAAACGTTTCAGGGCTCGATTTCCGAAACCTTCAGTTCCTGGAACAATTTTCGTACCGATCTCGATCTCTCCGGCCCTCTCAATGAGGCCGGCACCGTGCGCGGGCGCTTTGCCGGCGCCTTGCTCGACGGCGATTCCTGGCTCGATCATTACCACAAGCGTCGTAACGTGCTGTATGGCGTGATCGAGGCCGATCTCACCGACAACACCATGCTGACGATCGGCAGCGACTATCAAAAGGACAAATCGCGCGGCGCGCAATGGGGCGGCCTGCCGATGTTCTTCTCGGACGGCACGCGAACCAATTGGGACATCTCGACCAACCCGGGCGCGGTCTGGAGCCGCGATGATCTTTCGGTCAACACTTACTTTGCCACTCTTGAGCACAGCTTCGACAATGGTTGGAGAGCGGTCGGATCCTTCAATCATCGCCGCACCGTATCGGACTTCATGCTGGGATCCGCCAGCGCCGGATATCCAGATCCGGTGACCGGTGCAGGTGTCTCTCAATTCATCTGGAAGGGCCCGTTCAATACGATCCAGAACACCGCCGATCTCAAGGTCTCGGGCCCGGTAGACCTATTGGGACGGACGCATGAGTTGATGTTCGGCGTCCTGGCGACGCGCAGATCGGAGAAGGGGCTTTACTACGATGACCCTTCTTATCCGTTTTTGGGTGGGCCTCCCACCTACGATCCTTCCGTTCCCAACTTCTTCACCTGGAGCGGCAATTCGCAGGTGCCTCCTTTCGAGCTCTTAGGCAGGATCGAGAGTTCTTATTCGCGCACGGGCACCTTTGCCGCGACCCGTCTCAAGCCCGTGGACAAGCTGTCCATCATCCTGGGTGGCCGGCTCGACTGGTGGAGCTTCAACGACAAGGGAACCTATATCGACCCGTTGGCGGAGTGGTTGTATCCGGCTCAATATTCCGTCAATGCCAAGATCACGCCCTATGCCGGCATCGTCTACGACCTGACCGACGTTTATTCGCTATACGGCAGCTATACGAGCATCTTCGCGCCGGATGGCTATCGCGACGTCAACCGCAATTTTCTCCCGCCGACCGAAGGCGACAGCTACGAGGCCGGCGTCAAGGCCGCCTATTTCGGCGGCGCGCTCAATCTCACCGCCGCCGTGTTCATGATCCAGCAGAAGAACTTCCACGAATTTGCCGGATTCGATCCGATTTCCGGAGATAATTACTATCGTTCGATCGACGGCGTCACATCGAAGGGCTTCGAATTCGACTTGGCGGGACAACTGGCCCCCGGGTTGCAGATTAGTGCCGGCTACACTCACACTCACGCCCGGACGTCCGACGGATCGCTGGTCTATTCGTACATCCAGACCACGGCTCCGGAAAACGTCGTCAGGCTCTTTGCGACCTATCGTCTGCCGGATCAATGGGATCGATGGACGATCGGCGGCGGTTTCCGCTGGCAGGATACCATTCACGGGTACGTCAATTCCAATCCGTTCGGCGAAAGGCAGGACTTGGCGCAGGGCGATGTGTTTCTTCTCGACCTGATGGCGCGCTTTCGCCTGACCGAAAAGGTCGAGATCGCATTCAACGCGACCAATCTGCTGAACCAGAAATACTATTCCGTATTCCGCAATTACGACACGGGCGTGTACGGCGAGCCGCGTCGATACACCGTGTCCACCAAATTCCGGTTCTGA
PROTEIN sequence
Length: 704
VQGRPTSDPGATEGSGSYTTTQMSSSTGLPLSIRETPQSVSVISRQRMDDQNIRTFKDAMENATGITSQSWDNDRVEFMSRGFKLAEFRYDGVPVDVDGAGDHGLSTVDMAIYDRVEVTKGASGLLQGAGSPGAAVNLVRKRPTKTFQGSISETFSSWNNFRTDLDLSGPLNEAGTVRGRFAGALLDGDSWLDHYHKRRNVLYGVIEADLTDNTMLTIGSDYQKDKSRGAQWGGLPMFFSDGTRTNWDISTNPGAVWSRDDLSVNTYFATLEHSFDNGWRAVGSFNHRRTVSDFMLGSASAGYPDPVTGAGVSQFIWKGPFNTIQNTADLKVSGPVDLLGRTHELMFGVLATRRSEKGLYYDDPSYPFLGGPPTYDPSVPNFFTWSGNSQVPPFELLGRIESSYSRTGTFAATRLKPVDKLSIILGGRLDWWSFNDKGTYIDPLAEWLYPAQYSVNAKITPYAGIVYDLTDVYSLYGSYTSIFAPDGYRDVNRNFLPPTEGDSYEAGVKAAYFGGALNLTAAVFMIQQKNFHEFAGFDPISGDNYYRSIDGVTSKGFEFDLAGQLAPGLQISAGYTHTHARTSDGSLVYSYIQTTAPENVVRLFATYRLPDQWDRWTIGGGFRWQDTIHGYVNSNPFGERQDLAQGDVFLLDLMARFRLTEKVEIAFNATNLLNQKYYSVFRNYDTGVYGEPRRYTVSTKFRF*