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SCNpilot_cont_300_bf_scaffold_1318_curated_8

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: comp(8029..8544)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI000367BAA5 similarity UNIREF
DB: UNIREF100
  • Identity: 58.1
  • Coverage: 167.0
  • Bit_score: 197
  • Evalue 9.30e-48
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 59.0
  • Coverage: 161.0
  • Bit_score: 195
  • Evalue 1.10e-47
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABL71062.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.0
  • Coverage: 161.0
  • Bit_score: 195
  • Evalue 5.00e-47

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Taxonomy

Paracoccus denitrificans → Paracoccus → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGAAGGCGATCGGCAATCTTCTGTCCGAGATGTTTCGGCTGTACCATCGTGAGCTGGTGCGCTTTGCCACGCGCCTGGTCGGCGATCGTGACGATGGCGAGGAAATCGTGCAGGACGCCTATATGAGCATCGCGGGGCGTGGGACTCGGGCCGGCGCGATCGGGCATCCGAAGAGCTATCTGTTTACTGCCGCGCGCAACGCCGCCATCGACTTCACCGCTCGACGAAAGATCGAATGGTCCTATCGCGTTGACGTCGACGGCATCGAGGATCTTGCGTCGGAAAACGATCCGTTTGCAGCACTCGAGCAAAGGCAACAGCTCGCCCGGCTCATCGTCGCGCTCAACGAGCTTCCCCCTGCCTGCCGCCGCGCGTTCATCCTCAACAAGATCGAGGGGCGCGGCCATCAGGAGATTGCGCGATTGCTCGGGATCTCGGTGAGCATGGTGGAAAAGCACATCATGCGCGCACTGCGGCAGGCCCGCGACCTGCGGCGCGAGGATGGTTCTTTTTAA
PROTEIN sequence
Length: 172
MKAIGNLLSEMFRLYHRELVRFATRLVGDRDDGEEIVQDAYMSIAGRGTRAGAIGHPKSYLFTAARNAAIDFTARRKIEWSYRVDVDGIEDLASENDPFAALEQRQQLARLIVALNELPPACRRAFILNKIEGRGHQEIARLLGISVSMVEKHIMRALRQARDLRREDGSF*