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SCNpilot_cont_300_bf_scaffold_1318_curated_11

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: comp(11503..12486)

Top 3 Functional Annotations

Value Algorithm Source
Anti-FecI sigma factor, FecR n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QU68_METTR similarity UNIREF
DB: UNIREF100
  • Identity: 54.8
  • Coverage: 321.0
  • Bit_score: 318
  • Evalue 9.00e-84
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:EUB98242.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.8
  • Coverage: 333.0
  • Bit_score: 291
  • Evalue 1.70e-75
anti-FecI sigma factor FecR; K07165 transmembrane sensor similarity KEGG
DB: KEGG
  • Identity: 34.5
  • Coverage: 322.0
  • Bit_score: 169
  • Evalue 1.60e-39

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Taxonomy

Rhizobium sp. CF080 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 984
ATGAGAGAACGACAAGCGCCAGCCGTCAGTGACCGTGCCCGCAAGGAAGCGCGCGACTGGATCGTGCGTCTGTCGTCCGGCGCGGTGTCGGAGGCCGAGCTTGCGCAGTTCAAGGCCTGGCAGGCGGCATCCGATCATGCGCGCGCCTTCGCCGAGGAGCGGCGCTTCTGGGGGCAACTCGGTCGTCTCGAGACGAGCCGGACGTCTGCGGCCACGGAAACTGCGGCCAAGCCCCGCCTCGTCGGCCGTCGGGCCGTTCTTGCCGGCGGCGGGGCGCTCGCCGCATCGATCGCGGGCGTTATGGTTGCGCCAAGGATCAAGCTGCTGTGGGAGGCGGATTACCGCACGGCGGTTGGCGAGCAGAGGCGCGTCGCCTTGCCGGATGGCGCGGTGGCGACGCTGAACACCGATAGCGCGATTGCGCTGGACTATCGTCCGGATTTGCGTCTCGTTCATCTGCTGCGCGGCGAGGCTTTTTTTGAGGTGAGGCCGCAGGGAGGGCGAGGGCTACGTGTCGCCGCGCTCGGTGGAGTGACGCGCATGACCGAAGCGGCCTGCGCGGTCAGGCTGGCCGATGCCGAGGCTGTAGTCACGGTGGCCTCAGGACAGGTTGAGGTATTTTGTCCGGCTTCGCCCGCTGCTGCGGCGCTGGGCGAGGCCTCGCCGGTTGCCCTCGGCGCGGACCAGATGACCCGCTATGCGCAAGGTCATCCGCCTGCTTCGGCGACGGCCGTGGACATGCAGGCGGTCTTGGCATGGCGGTCTGGCCGGATCGTCTTCGAAGGGCGGCCGCTCGCGCGGGCGCTGGTCGAGCTTGAACGCTATGTGCCCGAGCGGATTATCCTCGCCGACCAGAGCCGAGCCGGCGAGCTGGTCAGCGGCGTCTTCTCAATCCGCCAGGCTCAAGCCGCGATCGAGGCGCTGGCGCAGACGCAAAATCTCACGGCGAGGCGCATCCCCGGCGTGATGATCGTCATCAGCTAG
PROTEIN sequence
Length: 328
MRERQAPAVSDRARKEARDWIVRLSSGAVSEAELAQFKAWQAASDHARAFAEERRFWGQLGRLETSRTSAATETAAKPRLVGRRAVLAGGGALAASIAGVMVAPRIKLLWEADYRTAVGEQRRVALPDGAVATLNTDSAIALDYRPDLRLVHLLRGEAFFEVRPQGGRGLRVAALGGVTRMTEAACAVRLADAEAVVTVASGQVEVFCPASPAAAALGEASPVALGADQMTRYAQGHPPASATAVDMQAVLAWRSGRIVFEGRPLARALVELERYVPERIILADQSRAGELVSGVFSIRQAQAAIEALAQTQNLTARRIPGVMIVIS*