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SCNpilot_cont_300_bf_scaffold_3091_curated_13

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: comp(11281..11802)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L21 n=1 Tax=Afipia felis ATCC 53690 RepID=K8NR19_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 173.0
  • Bit_score: 253
  • Evalue 1.40e-64
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 173.0
  • Bit_score: 253
  • Evalue 2.00e-64
rplU; 50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 145.0
  • Bit_score: 245
  • Evalue 9.50e-63

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 522
ATGTTCGCAGTCATCAAAACCGGCGGCCGGCAATATCGCGTCGTTCCGGATGATGTGCTCGAGATTGGCAAGATCGCCGGCGAGGTCGGAACGATCGTGCAGCTTGGCGAGGTTCTGGTGCTCGGCGGCGACACGCCGGTGCTCGGCGCGCCCACGGTGGCCGGCGCTTCGGTCGCCGCGGAAGTGCTGCAGCACAAGCGCGGTCCAAAGGTGATCGCGTTCAAGAAGCGCCGCCGCAAGCATTCGAAACGCAAGCGCGGTTATCGCGACGAGATCACGGTGTTGCGCATCACCGAGATCCTGGCTGGCGGCAAGGCCCCGACAATCGGACCGCGCCCCAAGAAGGAAAAGGTCGTCGAGCCGACCGAGGGCGACGGCGAGGCGCCGAAGGCCGCGAAGAAAAAGGCCGATTCGAAGACATCGGCCAAGGCGGCCGCGACCAAGCCTCCCGCAAAAAAGGCGGCCGCCAAGAAGCCGGCAGCCAAAAAACCGGCAGCCAAGAAGGCGAAAAGCGAAGAATAA
PROTEIN sequence
Length: 174
MFAVIKTGGRQYRVVPDDVLEIGKIAGEVGTIVQLGEVLVLGGDTPVLGAPTVAGASVAAEVLQHKRGPKVIAFKKRRRKHSKRKRGYRDEITVLRITEILAGGKAPTIGPRPKKEKVVEPTEGDGEAPKAAKKKADSKTSAKAAATKPPAKKAAAKKPAAKKPAAKKAKSEE*