name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_300_bf_scaffold_107_curated_1
unknown
|
Not on your lists |
2..157
|
This feature has no annotations |
|
SCNpilot_expt_300_bf_scaffold_107_curated_2
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(130..999)
|
Regulatory protein, LuxR:Response regulator receiver n=1 Tax=Nitrosospira sp. APG3 RepID=M5DQE1_9PROT
Regulatory protein, LuxR:Response regulator receiver {ECO:0000313|EMBL:CCU61655.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
two component LuxR family transcriptional regulator
|
|
SCNpilot_expt_300_bf_scaffold_107_curated_3
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1115..2272)
|
Probable two-component sensor, near polyamine transporter n=1 Tax=Nitrosospira sp. APG3 RepID=M5DF97_9PROT
Histidine kinase {ECO:0000313|EMBL:KIO49094.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
histidine kinase, dimerisation and phosphoacceptor region
|
|
SCNpilot_expt_300_bf_scaffold_107_curated_4
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2444..2749
|
vanillate O-demethylase oxidoreductase VanB n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174562B
Vanillate O-demethylase oxidoreductase VanB {ECO:0000313|EMBL:KIO50006.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_107_curated_5
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2736..3080
|
Transcriptional regulator, ArsR family n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7Q4D5_METSZ
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:BAQ18806.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
ArsR family transcriptional regulator
|
|
SCNpilot_expt_300_bf_scaffold_107_curated_6
unknown
|
Not on your lists |
3032..3220
|
This feature has no annotations |
|
SCNpilot_expt_300_bf_scaffold_107_curated_7
Pseudomonas sp. FGI182, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3530..6202)
|
Uncharacterized protein n=1 Tax=Arthrospira platensis C1 RepID=K1W8J6_ARTPT
Uncharacterized protein {ECO:0000313|EMBL:AHD12781.1}; TaxID=1259844 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. FGI182.;"
chromosome partitioning ATPase
|
|
SCNpilot_expt_300_bf_scaffold_107_curated_8
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6199..6654)
|
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BRE5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EDN70890.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
|
|
SCNpilot_expt_300_bf_scaffold_107_curated_9
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7011..7619)
|
Methyltransferase type 12 n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EMS6_METSB
type 12 methyltransferase
Methyltransferase type 12 {ECO:0000313|EMBL:ACK52755.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
|
|
SCNpilot_expt_300_bf_scaffold_107_curated_10
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7635..7946)
|
Uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9CWF0_9RHIZ
Plasmid stabilization system protein {ECO:0000313|EMBL:EDQ35510.1}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;"
plasmid stabilization system
|
|
SCNpilot_expt_300_bf_scaffold_107_curated_11
unknown
|
Not on your lists |
comp(7915..8094)
|
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI000364A70A
|
|
SCNpilot_expt_300_bf_scaffold_107_curated_12
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8456..8785)
|
Putative transcriptional regulator n=1 Tax=Azoarcus sp. KH32C RepID=H0PZW3_9RHOO
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:BAL25601.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
|
|
SCNpilot_expt_300_bf_scaffold_107_curated_13
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8782..9105)
|
addiction module killer protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00037B335A
Addiction module killer protein {ECO:0000313|EMBL:BAP88177.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_107_curated_14
uncultured bacterium, Bacteria
|
Not on your lists |
comp(9401..9847)
|
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
recombinase n=1 Tax=Rhizobium leguminosarum RepID=UPI000360F729
stbB; Plasmid stability protein StbB, putative; K07062
|
|
SCNpilot_expt_300_bf_scaffold_107_curated_15
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9847..10146)
|
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N7J3_RHOPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF83819.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
|
|
SCNpilot_expt_300_bf_scaffold_107_curated_16
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10297..11232)
|
Flagellar hook-associated protein FlgL n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGW0_9PROT
Flagellar hook protein FlgL {ECO:0000313|EMBL:KIO49095.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
flgL; flagellar hook-associated protein FlgL; K02397 flagellar hook-associated protein 3 FlgL
|
|
SCNpilot_expt_300_bf_scaffold_107_curated_17
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11308..13218)
|
Flagellar hook-associated protein FlgK n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH76_9PROT
Flagellar hook-associated protein FlgK {ECO:0000313|EMBL:CCU61658.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
flgK; flagellar hook-associated protein FlgK; K02396 flagellar hook-associated protein 1 FlgK
|
|
SCNpilot_expt_300_bf_scaffold_107_curated_18
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13381..14346)
|
Flagellar protein FlgJ [peptidoglycan hydrolase] n=1 Tax=Nitrosospira sp. APG3 RepID=M5DQE7_9PROT
Flagellar protein FlgJ [peptidoglycan hydrolase] {ECO:0000313|EMBL:CCU61660.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; K02395 flagellar protein FlgJ
|
|
SCNpilot_expt_300_bf_scaffold_107_curated_19
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14346..15494)
|
Flagellar P-ring protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DF98_9PROT
Flagellar P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Basal body P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Flags: Precursor;; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
flgI; flagellar basal body P-ring protein; K02394 flagellar P-ring protein precursor FlgI
|
|
SCNpilot_expt_300_bf_scaffold_107_curated_20
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15504..16265)
|
Flagellar L-ring protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGW5_9PROT
Flagellar L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Basal body L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
flgH; flagellar basal body L-ring protein; K02393 flagellar L-ring protein precursor FlgH
|
|
SCNpilot_expt_300_bf_scaffold_107_curated_21
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16310..17092)
|
Flagellar basal-body rod protein FlgG n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH80_9PROT
Flagellar basal-body rod protein FlgG {ECO:0000313|EMBL:CCU61663.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein; K02392 flagellar basal-body rod protein FlgG
|
|
SCNpilot_expt_300_bf_scaffold_107_curated_22
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17442..18194)
|
Flagellar basal-body rod protein FlgF n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGQ9_9PROT
Flagellar basal-body rod protein FlgF {ECO:0000313|EMBL:CCU61664.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
flgF; flagellar basal body rod protein FlgF; K02391 flagellar basal-body rod protein FlgF
|
|
SCNpilot_expt_300_bf_scaffold_107_curated_23
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18302..19522)
|
Flagellar hook protein FlgE n=1 Tax=Nitrosospira sp. APG3 RepID=M5DQF3_9PROT
Flagellar hook protein FlgE {ECO:0000313|EMBL:CCU61665.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
flgE; flagellar hook protein FlgE; K02390 flagellar hook protein FlgE
|
|
SCNpilot_expt_300_bf_scaffold_107_curated_24
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19607..20275)
|
Flagellar basal-body rod modification protein FlgD n=1 Tax=Nitrosospira sp. APG3 RepID=M5DF99_9PROT
Flagellar basal body rod modification protein FlgD {ECO:0000313|EMBL:KIO49102.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
flgD; flagellar basal body rod modification protein; K02389 flagellar basal-body rod modification protein FlgD
|
|
SCNpilot_expt_300_bf_scaffold_107_curated_25
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20287..20742)
|
Flagellar basal-body rod protein FlgC n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9E6_NITMU
flagellar basal-body rod protein FlgC; K02388 flagellar basal-body rod protein FlgC
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
|
|
SCNpilot_expt_300_bf_scaffold_107_curated_26
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20757..21155)
|
Flagellar basal body rod protein FlgB n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH84_9PROT
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
flagellar basal-body rod protein FlgB; K02387 flagellar basal-body rod protein FlgB
|
|
SCNpilot_expt_300_bf_scaffold_107_curated_27
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21509..22240
|
Flagellar basal-body P-ring formation protein FlgA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DQF9_9PROT
Flagella basal body P-ring formation protein FlgA {ECO:0000256|RuleBase:RU362063}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
flageller protein FlgA; K02386 flagella basal body P-ring formation protein FlgA
|
|
SCNpilot_expt_300_bf_scaffold_107_curated_28
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22503..22811
|
Anti-sigma-28 factor, FlgM n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFA0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO49106.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
anti-sigma-28 factor FlgM; K02398 negative regulator of flagellin synthesis FlgM
|
|
SCNpilot_expt_300_bf_scaffold_107_curated_29
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22826..23293
|
FlgN n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGX2_9PROT
Flagellar biosynthesis protein FlgN {ECO:0000313|EMBL:KIO49217.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
FlgN; K02399 flagella synthesis protein FlgN
|
|
SCNpilot_expt_300_bf_scaffold_107_curated_30
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23714..24613)
|
Flagellar motor rotation protein MotB n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH88_9PROT
Flagellar motor protein MotD {ECO:0000313|EMBL:KIO49218.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
flagellar motor protein MotD; K02557 chemotaxis protein MotB
|