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SCNpilot_expt_300_bf_scaffold_156_curated

Search features with annotation key words

Displaying items 61-86 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_156_curated_61

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55700..56494
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QXI3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI11957.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_156_curated_62
unknown

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comp(56522..56821)
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_156_curated_63
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(56818..57069)
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Methylomicrobium buryatense RepID=UPI00034A8CD7
Uncharacterized protein {ECO:0000313|EMBL:KGM34193.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
SCNpilot_expt_300_bf_scaffold_156_curated_64
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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58032..58298
DNA (267bp) protein (89aa)
Transcriptional regulator, AbrB family n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GF31_NITSI
AbrB family transcriptional regulator
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:AEJ02255.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
SCNpilot_expt_300_bf_scaffold_156_curated_65
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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58295..58684
DNA (390bp) protein (130aa)
PilT protein domain protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GF32_NITSI
PilT protein domain-containing protein
PilT protein domain protein {ECO:0000313|EMBL:AEJ02256.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
SCNpilot_expt_300_bf_scaffold_156_curated_66
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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58974..59252
DNA (279bp) protein (93aa)
Uncharacterized protein n=4 Tax=Microcystis RepID=I4FVN0_MICAE
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAG02750.1}; TaxID=449447 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa (strain NIES-843).;"
SCNpilot_expt_300_bf_scaffold_156_curated_67
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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59249..59584
DNA (336bp) protein (112aa)
XRE family transcriptional regulator n=1 Tax=Pusillimonas noertemannii RepID=UPI0002EF6351
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CCH99706.1}; TaxID=1160286 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PCC 9717.;"
SCNpilot_expt_300_bf_scaffold_156_curated_68
unknown

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comp(59444..59761)
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_156_curated_69
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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60253..61518
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00037517B6
Uncharacterized protein {ECO:0000313|EMBL:EXI69845.1}; TaxID=1454001 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_156_curated_70
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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61560..62342
DNA (783bp) protein (261aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WVJ2_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR69502.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_156_curated_71
unknown

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62339..63037
DNA (699bp) protein (233aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_156_curated_72
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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63122..63373
DNA (252bp) protein (84aa)
Prevent-host-death family protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GCY1_NITSI
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:AEJ03132.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
SCNpilot_expt_300_bf_scaffold_156_curated_73
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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63383..63775
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W6L5_MAGSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAE50510.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
SCNpilot_expt_300_bf_scaffold_156_curated_74
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64310..65953
DNA (1644bp) protein (548aa)
serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1]
Serine/threonine protein kinase with Chase2 sensor n=1 Tax=Nitrosospira sp. APG3 RepID=M5DQ37_9PROT
Serine/threonine protein kinase with Chase2 sensor {ECO:0000313|EMBL:CCU61565.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
SCNpilot_expt_300_bf_scaffold_156_curated_75
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65940..66932
DNA (993bp) protein (331aa)
Polysaccharide deacetylase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DF79_9PROT
Polysaccharide deacetylase {ECO:0000313|EMBL:CCU61566.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
polysaccharide deacetylase
SCNpilot_expt_300_bf_scaffold_156_curated_76
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66929..67438
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGN9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU61567.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
SCNpilot_expt_300_bf_scaffold_156_curated_77
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67635..68762)
DNA (1128bp) protein (376aa)
Hypothetical secreted protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGZ2_9PROT
Hypothetical secreted protein {ECO:0000313|EMBL:CCU61568.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_156_curated_78
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69181..71118
DNA (1938bp) protein (646aa)
Hypothetical regulatory protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGZ6_9PROT
Hypothetical regulatory protein {ECO:0000313|EMBL:CCU61573.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
regulatory protein; K07169 FHA domain-containing protein
SCNpilot_expt_300_bf_scaffold_156_curated_79
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71144..71965
DNA (822bp) protein (274aa)
Protein serine/threonine phosphatase PrpC,regulation of stationary phase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGG1_9PROT
Protein serine/threonine phosphatase PrpC,regulation of stationary phase {ECO:0000313|EMBL:CCU61574.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
putative phosphoprotein phosphatase
SCNpilot_expt_300_bf_scaffold_156_curated_80
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72103..72864)
DNA (762bp) protein (254aa)
Protein phosphatase ImpM n=1 Tax=Nitrosospira sp. APG3 RepID=M5DQ47_9PROT
Protein phosphatase ImpM {ECO:0000313|EMBL:CCU61575.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein; K11890 type VI secretion system protein ImpM
SCNpilot_expt_300_bf_scaffold_156_curated_81
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72827..76444)
DNA (3618bp) protein (1206aa)
IcmF-related protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DF81_9PROT
IcmF-related protein {ECO:0000313|EMBL:CCU61576.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
imcF; ImcF-like protein; K11891 type VI secretion system protein ImpL
SCNpilot_expt_300_bf_scaffold_156_curated_82
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76481..77797)
DNA (1317bp) protein (439aa)
Outer membrane protein ImpK/VasF, OmpA/MotB domain n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGP7_9PROT
Outer membrane protein ImpK/VasF, OmpA/MotB domain {ECO:0000313|EMBL:CCU61577.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
ompA2; hypothetical protein; K11892 type VI secretion system protein ImpK
SCNpilot_expt_300_bf_scaffold_156_curated_83
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77947..79284)
DNA (1338bp) protein (446aa)
Uncharacterized protein ImpJ/VasE n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH01_9PROT
Uncharacterized protein ImpJ/VasE {ECO:0000313|EMBL:CCU61578.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
type VI secretion protein
SCNpilot_expt_300_bf_scaffold_156_curated_84
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79353..79892)
DNA (540bp) protein (180aa)
Type VI secretion lipoprotein/VasD n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGG5_9PROT
Type VI secretion lipoprotein/VasD {ECO:0000313|EMBL:CCU61579.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein; K11906 type VI secretion system protein VasD
SCNpilot_expt_300_bf_scaffold_156_curated_85
Nitrosomonas eutropha, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(80388..81446)
DNA (1059bp) protein (353aa)
Phage integrase family protein n=1 Tax=Nitrosomonas eutropha (strain C91) RepID=Q0AFY9_NITEC
phage integrase family protein
Phage integrase family protein {ECO:0000313|EMBL:ABI59743.1}; TaxID=335283 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas eutropha (strain C91).;"
SCNpilot_expt_300_bf_scaffold_156_curated_86
unknown

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comp(81683..81874)
DNA (192bp) protein (64aa)

This feature has no annotations

Displaying items 61-86 of 86 in total

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