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SCNpilot_expt_300_bf_scaffold_156_curated_84

Organism: scnpilot_dereplicated_Nitrosospira_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(79353..79892)

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion lipoprotein/VasD n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGG5_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 66.4
  • Coverage: 122.0
  • Bit_score: 179
  • Evalue 3.60e-42
Type VI secretion lipoprotein/VasD {ECO:0000313|EMBL:CCU61579.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.4
  • Coverage: 122.0
  • Bit_score: 179
  • Evalue 5.00e-42
hypothetical protein; K11906 type VI secretion system protein VasD similarity KEGG
DB: KEGG
  • Identity: 37.7
  • Coverage: 167.0
  • Bit_score: 120
  • Evalue 4.80e-25

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGAGGTTTTTGTGGCGCGCTATGCAATTTATCCCGGTTGCGGGGTTTCTTCTACTGTTTGGATGCGCCAGCACGCCAAAACCGACGATAGTCAAGGTTACCCTCCAGGCTCAGCAAAACGTGAATCCGGATATGAATGGCCGGGCTTCGCCAGTGATTCTGAAATTTTACGAACTCAAATCCGTTACGGCATTCAATGCGGCCGACTTCTTTTCCACTTTTGACGGTGAGCAAAAAACCCTGGGTGCCGAGCTTGTCAACAGCGAGGTATTCCAGTTGCGTCCGGGCGAGACGCTTGAATTCGACAGGCCGCTGAGCGCTGATACTCGGCATCTGGCAGCGATTGCTGCCTTTCGCGATCTCGAGCGCTCGCAGTGGCGGGCAACCTTGACGCTCCCGCCGAAAGCCAAACTCTCCCAGGTGATTGTCCGGCTGGATGGCAACAAGGTGCTGATGGGCGCGGAACAGGAATGTTCGTTTCCTTGCGGTATCACGTCGAAAAAGCCGCCGCCGCTCGGCAACGCGCAGCAGGAAAAATAA
PROTEIN sequence
Length: 180
MRFLWRAMQFIPVAGFLLLFGCASTPKPTIVKVTLQAQQNVNPDMNGRASPVILKFYELKSVTAFNAADFFSTFDGEQKTLGAELVNSEVFQLRPGETLEFDRPLSADTRHLAAIAAFRDLERSQWRATLTLPPKAKLSQVIVRLDGNKVLMGAEQECSFPCGITSKKPPPLGNAQQEK*