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SCNpilot_expt_300_bf_scaffold_1268_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1268_curated_1
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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117..1580
DNA (1464bp) protein (488aa)
uroporphyrin-III C-methyltransferase; K02302 uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
Siroheme synthase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DG40_9PROT
Siroheme synthase {ECO:0000256|HAMAP-Rule:MF_01646}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
SCNpilot_expt_300_bf_scaffold_1268_curated_2
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1634..2272)
DNA (639bp) protein (213aa)
peroxidase (EC:1.11.1.7)
Alkyl hydroperoxide reductase subunit C-like protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFT6_9PROT
Peroxidase {ECO:0000313|EMBL:KIO48276.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_expt_300_bf_scaffold_1268_curated_3
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2374..3774)
DNA (1401bp) protein (467aa)
Membrane-bound lytic murein transglycosylase F {ECO:0000256|HAMAP-Rule:MF_02016}; EC=4.2.2.n1 {ECO:0000256|HAMAP-Rule:MF_02016};; Murein lyase F {ECO:0000256|HAMAP-Rule:MF_02016}; Flags: Precursor;; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Membrane-bound lytic murein transglycosylase F n=1 Tax=Nitrosospira sp. APG3 RepID=M5DEZ8_9PROT
putative transglycosylase
SCNpilot_expt_300_bf_scaffold_1268_curated_4
unknown

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comp(4131..4256)
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1268_curated_5
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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4489..5202
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI00036B81AE
Uncharacterized protein {ECO:0000313|EMBL:AKD58717.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_expt_300_bf_scaffold_1268_curated_6
unknown

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comp(5291..5827)
DNA (537bp) protein (179aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1268_curated_7
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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6182..6490
DNA (309bp) protein (103aa)
Uncharacterized protein {ECO:0000313|EMBL:KIO49582.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_expt_300_bf_scaffold_1268_curated_8
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7130..7687)
DNA (558bp) protein (186aa)
Acetyltransferase, GNAT family n=1 Tax=Nitrosococcus oceani AFC27 RepID=B6C5H0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFI18243.1}; TaxID=314279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani C-27.;"
GCN5-like N-acetyltransferase
SCNpilot_expt_300_bf_scaffold_1268_curated_9
unknown

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comp(7852..8034)
DNA (183bp) protein (61aa)

This feature has no annotations

Displaying 9 items

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