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SCNpilot_expt_300_bf_scaffold_471_curated

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_471_curated_1
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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174..3941
DNA (3768bp) protein (1256aa)
Uncharacterized protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GL22_NITSI
Uncharacterized protein {ECO:0000313|EMBL:AEJ01795.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_471_curated_2
unknown

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4684..4860
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_471_curated_3
unknown

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4853..5182
DNA (330bp) protein (110aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_471_curated_4
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5188..5418
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WWF1_DELAC
Uncharacterized protein {ECO:0000313|EMBL:KGM57402.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
Type III restriction protein res subunit
SCNpilot_expt_300_bf_scaffold_471_curated_5
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5511..6878)
DNA (1368bp) protein (456aa)
Putative cytochrome c1 signal peptide protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBE6_NITMU
putative cytochrome c1 signal peptide protein
Putative cytochrome c1 signal peptide protein {ECO:0000313|EMBL:ABB73925.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_expt_300_bf_scaffold_471_curated_6
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7349..7870
DNA (522bp) protein (174aa)
membrane protein n=1 Tax=Rhizobium giardinii RepID=UPI0003720BD4
Membrane protein {ECO:0000313|EMBL:KIO49851.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_471_curated_7
unknown

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7930..8142
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_471_curated_8
Nitrosomonas communis, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8258..10141
DNA (1884bp) protein (628aa)
Phospholipase A2 family protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PUV2_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:AKH39551.1}; TaxID=44574 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas communis.;"
phospholipase A2 family protein
SCNpilot_expt_300_bf_scaffold_471_curated_9
unknown

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comp(10034..10264)
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_471_curated_10
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10261..11229)
DNA (969bp) protein (323aa)
Isoaspartyl aminopeptidase @ Asp-X dipeptidase {ECO:0000313|EMBL:CCU63366.1}; EC=3.4.19.5 {ECO:0000313|EMBL:CCU63366.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
peptidase T2 asparaginase 2; K13051 beta-aspartyl-peptidase (threonine type) [EC:3.4.19.5]
Isoaspartyl aminopeptidase @ Asp-X dipeptidase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJ07_9PROT
SCNpilot_expt_300_bf_scaffold_471_curated_11
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11512..12408
DNA (897bp) protein (299aa)
Universal stress protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DK42_9PROT
Universal stress protein {ECO:0000313|EMBL:CCU62913.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_471_curated_12
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12469..12939)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y716_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB75455.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_expt_300_bf_scaffold_471_curated_13
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13250..14692
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PS62_9RHOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL24001.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
SCNpilot_expt_300_bf_scaffold_471_curated_14
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15141..16337
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH42_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU61742.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_471_curated_15
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16655..17041)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DVK5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU63365.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_471_curated_16
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17078..19222)
DNA (2145bp) protein (715aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKH5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU63364.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_471_curated_17
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19368..22571)
DNA (3204bp) protein (1068aa)
Acriflavin resistance protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7Y4_NITMU
Acriflavin resistance protein {ECO:0000313|EMBL:KIO47877.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
acriflavin resistance protein
SCNpilot_expt_300_bf_scaffold_471_curated_18
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22648..23376)
DNA (729bp) protein (243aa)
Secretion protein HlyD n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7Y5_NITMU
Secretion protein HlyD {ECO:0000313|EMBL:KIO47876.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
secretion protein HlyD
SCNpilot_expt_300_bf_scaffold_471_curated_19
unknown

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23660..23911
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_471_curated_20
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23861..25237)
DNA (1377bp) protein (459aa)
RND efflux system, outer membrane lipoprotein, NodT n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7Y6_NITMU
Transporter {ECO:0000313|EMBL:KIO47875.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
RND efflux system outer membrane lipoprotein NodT
SCNpilot_expt_300_bf_scaffold_471_curated_21
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25742..26254
DNA (513bp) protein (171aa)
Sigma-24 (FecI-like) n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7Y7_NITMU
Extracytoplasmic-function sigma-70 factor {ECO:0000313|EMBL:KIO47872.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
extracytoplasmic-function sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_expt_300_bf_scaffold_471_curated_22
Halomonas sp. R57-5, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26417..26632
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034CC052
Uncharacterized protein {ECO:0000313|EMBL:CEP37354.1}; TaxID=1610576 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. R57-5.;"
SCNpilot_expt_300_bf_scaffold_471_curated_23
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26688..27410)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCP6_NITMU
Uncharacterized protein {ECO:0000313|EMBL:KIO47871.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_471_curated_24
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27631..27861
DNA (231bp) protein (77aa)
MbtH-like protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7Y9_NITMU
MbtH-like protein; K05375 MbtH protein
Antibiotic synthesis protein MbtH {ECO:0000313|EMBL:KIO47870.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_expt_300_bf_scaffold_471_curated_25
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27861..28637
DNA (777bp) protein (259aa)
Thioesterase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7Z0_NITMU
Thioesterase {ECO:0000313|EMBL:KIO47869.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
thioesterase
SCNpilot_expt_300_bf_scaffold_471_curated_26
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28918..34227
DNA (5310bp) protein (1770aa)
Amino acid adenylation n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7Z2_NITMU
Thioester reductase {ECO:0000313|EMBL:KIO47868.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
amino acid adenylation
SCNpilot_expt_300_bf_scaffold_471_curated_27
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34227..38876
DNA (4650bp) protein (1550aa)
Beta-ketoacyl synthase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7Z3_NITMU
Polyketide synthase {ECO:0000313|EMBL:KIO47867.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
beta-ketoacyl synthase
SCNpilot_expt_300_bf_scaffold_471_curated_28
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38931..39143
DNA (213bp) protein (71aa)
Amino acid adenylation n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7Z4_NITMU
Uncharacterized protein {ECO:0000313|EMBL:KIO47866.1}; Flags: Fragment;; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
amino acid adenylation
Displaying 28 items

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