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SCNpilot_expt_300_bf_scaffold_165_curated

Search features with annotation key words

Displaying items 1-30 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_165_curated_1
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(249..1109)
DNA (861bp) protein (287aa)
Beta-lactamase-like protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8D7_NITMU
beta-lactamase-like protein
Beta-lactamase-like protein {ECO:0000313|EMBL:ABB74984.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_expt_300_bf_scaffold_165_curated_2

Not on your lists

comp(1751..2653)
DNA (903bp) protein (301aa)
monophenol monooxygenase (EC:1.14.18.1)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00037D3673
Common central domain of tyrosinase {ECO:0000313|EMBL:AIA12573.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_expt_300_bf_scaffold_165_curated_3

Not on your lists

comp(2650..3207)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI000361F726
Uncharacterized protein {ECO:0000313|EMBL:AIA12574.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_165_curated_4
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3853..4251)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6I4_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB75637.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_expt_300_bf_scaffold_165_curated_5
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4532..8629)
DNA (4098bp) protein (1366aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHZ9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62142.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_165_curated_6
Synechococcus sp. WH 5701, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

8813..10798
DNA (1986bp) protein (662aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI00035FDAF8
Uncharacterized protein {ECO:0000313|EMBL:EAQ75252.1}; TaxID=69042 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. WH 5701.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_165_curated_7
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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11086..12462
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RUQ5_ACCPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV36300.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
SCNpilot_expt_300_bf_scaffold_165_curated_8
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12459..16328
DNA (3870bp) protein (1290aa)
WD-40 repeat protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RUQ4_ACCPU
WD-40 repeat-containing protein
WD-40 repeat protein {ECO:0000313|EMBL:ACV36299.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
SCNpilot_expt_300_bf_scaffold_165_curated_9
unknown

Not on your lists

comp(16637..17029)
DNA (393bp) protein (131aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_165_curated_10
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18165..18992
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QK52_AZOSU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV25485.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
SCNpilot_expt_300_bf_scaffold_165_curated_11
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19093..19545)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI00035E175E
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_300_bf_scaffold_165_curated_12
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19607..20347)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFZ2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62141.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_165_curated_13
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20632..21750)
DNA (1119bp) protein (373aa)
ABC transport system, permease component YbhR n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJI6_9PROT
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
putative ABC-2 type transporter, permease protein
SCNpilot_expt_300_bf_scaffold_165_curated_14
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21755..23065)
DNA (1311bp) protein (437aa)
ABC transport system, permease component YbhS n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJL2_9PROT
ABC transport system, permease component YbhS {ECO:0000313|EMBL:CCU62922.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein; K09686 antibiotic transport system permease protein
SCNpilot_expt_300_bf_scaffold_165_curated_15
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23062..24936)
DNA (1875bp) protein (625aa)
ABC transporter multidrug efflux pump, fused ATP-binding domains n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHU6_9PROT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIO48161.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
ABC transporter-like protein; K01990 ABC-2 type transport system ATP-binding protein
SCNpilot_expt_300_bf_scaffold_165_curated_16
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24929..26011)
DNA (1083bp) protein (361aa)
Predicted membrane fusion protein (MFP) component of efflux pump, membrane anchor protein YbhG n=1 Tax=Nitrosospira sp. APG3 RepID=M5DU62_9PROT
Membrane protein {ECO:0000313|EMBL:KIO48257.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
secretion protein HlyD; K01993 HlyD family secretion protein
SCNpilot_expt_300_bf_scaffold_165_curated_17
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26041..26460)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DK46_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO48162.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_165_curated_18
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26484..27362)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJK9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO48163.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_expt_300_bf_scaffold_165_curated_19
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27384..28679
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJI0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62914.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_165_curated_20
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28966..29286
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJH4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO48170.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_165_curated_21
unknown

Not on your lists

comp(29355..29753)
DNA (399bp) protein (133aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_165_curated_22
unknown

Not on your lists

comp(30200..30346)
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_165_curated_23
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30452..30862)
DNA (411bp) protein (137aa)
Chain A, Red Copper Protein Nitrosocyanin n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHD1_9PROT
Nitrosocyanin {ECO:0000313|EMBL:KIO48503.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
chain A, red copper protein nitrosocyanin
SCNpilot_expt_300_bf_scaffold_165_curated_24
unknown

Not on your lists

comp(30944..31099)
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_165_curated_25
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31351..31674
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DI97_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62267.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_165_curated_26
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31872..32420
DNA (549bp) protein (183aa)
guanine deaminase (EC:3.5.4.3); K01487 guanine deaminase [EC:3.5.4.3]
Putative Guanine deaminase (Guanase) (Guanine aminase) (Guanine aminohydrolase) (GAH) (GDEase) {ECO:0000313|EMBL:CAL61070.1}; EC=3.5.4.3 {ECO:0000313|EMBL:CAL61070.1};; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas arsenicoxydans.;"
Putative Guanine deaminase (Guanase) (Guanine aminase) (Guanine aminohydrolase) (GAH) (GDEase) n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G3I3_HERAR
SCNpilot_expt_300_bf_scaffold_165_curated_27
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32490..33029)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5DW38_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESS71561.1}; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyloglobulus morosus KoM1.;"
SCNpilot_expt_300_bf_scaffold_165_curated_28
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33822..34352)
DNA (531bp) protein (177aa)
GCN5-related N-acetyltransferase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BYU8_NITHN
GCN5-like N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADE14161.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
SCNpilot_expt_300_bf_scaffold_165_curated_29
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34358..34543)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BYU7_NITHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE14160.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
SCNpilot_expt_300_bf_scaffold_165_curated_30
unknown

Not on your lists

comp(34754..34879)
DNA (126bp) protein (42aa)

This feature has no annotations

Displaying items 1-30 of 84 in total

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