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SCNpilot_expt_300_bf_scaffold_88_curated_4

Organism: scnpilot_dereplicated_Nitrosospira_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 2982..3539

Top 3 Functional Annotations

Value Algorithm Source
Ribosome-recycling factor n=1 Tax=Nitrosospira sp. APG3 RepID=M5DNM5_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 185.0
  • Bit_score: 332
  • Evalue 2.00e-88
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040, ECO:0000313|EMBL:KIO50235.1}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 185.0
  • Bit_score: 335
  • Evalue 5.70e-89
frr; ribosome recycling factor; K02838 ribosome recycling factor similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 185.0
  • Bit_score: 319
  • Evalue 9.40e-85

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGATTGCCGACATCAAAAAATCGACTGAGCAAAAAATGCAGAAGAGCTTTGAAGCACTAAAGGCGGATCTGGGAAAGGTGCGAACGGGCAGAGCCCATGCCGGGCTGCTTGATCATATTACAGTCGACTATTACGGAACGCCTACGCTCATCAGCCAGGTGGCAAATATCAGTCTGGCCGATGCGCGCACCATTACGGTTGCGCCCTGGGAAAAGAAGATGCTGAGCGTGATCGAGAAATCCATCAGAAATTCCGATCTCGGACTGAATCCGGTAACGGTAGGTGAATTGATCCGCGTGCCTATGCCACCTCTTACCGAAGAGCGCCGGCGCGATCTCGCCAAAGTGGTAAGGCACGAGGCTGAAACGGCACGTGTAGCGATGCGCAATATCCGGCGCGATGCGAATACCCACTTGAAGGATTTGCTCAAGGAAAAAAAGATTGCTGAAGATGAGGAGCGTCGCGGCCAGGATGAGATCCAGAAGATTACGGACCGCCACATCGCGGAAATAGATAAGCTGTTGCAAATCAAGGAAGCCGAATTGATGGCGATCTGA
PROTEIN sequence
Length: 186
MIADIKKSTEQKMQKSFEALKADLGKVRTGRAHAGLLDHITVDYYGTPTLISQVANISLADARTITVAPWEKKMLSVIEKSIRNSDLGLNPVTVGELIRVPMPPLTEERRRDLAKVVRHEAETARVAMRNIRRDANTHLKDLLKEKKIAEDEERRGQDEIQKITDRHIAEIDKLLQIKEAELMAI*