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SCNpilot_expt_300_bf_scaffold_88_curated

Search features with annotation key words

Displaying items 1-30 of 103 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_88_curated_1
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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447..1184
DNA (738bp) protein (246aa)
30S ribosomal protein S2 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=RS2_NITMU rbh
rpsB; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2
30S ribosomal protein S2 {ECO:0000255|HAMAP-Rule:MF_00291}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_expt_300_bf_scaffold_88_curated_2
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1258..2166
DNA (909bp) protein (303aa)
Elongation factor Ts n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFM2_9PROT
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
tsf; elongation factor Ts; K02357 elongation factor Ts
SCNpilot_expt_300_bf_scaffold_88_curated_3
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2175..2891
DNA (717bp) protein (239aa)
pyrH; uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22]
Uridylate kinase {ECO:0000255|HAMAP-Rule:MF_01220}; Short=UK {ECO:0000255|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000255|HAMAP-Rule:MF_01220};; Uridine monophosphate kinase {ECO:0000255|HAMAP-Rule:MF_01220}; Short=UMP kinase {ECO:0000255|HAMAP-Rule:MF_01220};; Short=UMPK {ECO:0000255|HAMAP-Rule:MF_01220};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Uridylate kinase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=PYRH_NITMU rbh
SCNpilot_expt_300_bf_scaffold_88_curated_4
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2982..3539
DNA (558bp) protein (186aa)
Ribosome-recycling factor n=1 Tax=Nitrosospira sp. APG3 RepID=M5DNM5_9PROT
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040, ECO:0000313|EMBL:KIO50235.1}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
frr; ribosome recycling factor; K02838 ribosome recycling factor
SCNpilot_expt_300_bf_scaffold_88_curated_5
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3649..4446
DNA (798bp) protein (266aa)
undecaprenyl diphosphate synthase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31]
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Isoprenyl transferase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBA3_NITMU
SCNpilot_expt_300_bf_scaffold_88_curated_6
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4497..5318
DNA (822bp) protein (274aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938, ECO:0000313|EMBL:KIO50233.1}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41]
Phosphatidate cytidylyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFV5_9PROT
SCNpilot_expt_300_bf_scaffold_88_curated_7
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5315..6502
DNA (1188bp) protein (396aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000255|HAMAP-Rule:MF_00183}; Short=DXP reductoisomerase {ECO:0000255|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000255|HAMAP-Rule:MF_00183};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000255|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00183}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (st
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=DXR_NITMU rbh
SCNpilot_expt_300_bf_scaffold_88_curated_8
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6730..8097
DNA (1368bp) protein (456aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
peptidase M50 membrane-associated zinc metallopeptidase; K11749 regulator of sigma E protease [EC:3.4.24.-]
Membrane-associated zinc metalloprotease n=1 Tax=Nitrosospira sp. APG3 RepID=M5DNM1_9PROT
SCNpilot_expt_300_bf_scaffold_88_curated_9
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8101..10383
DNA (2283bp) protein (761aa)
Outer membrane protein assembly factor BamA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFF9_9PROT
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; Flags: Precursor;; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
surface antigen (D15); K07277 outer membrane protein
SCNpilot_expt_300_bf_scaffold_88_curated_10
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10571..11098
DNA (528bp) protein (176aa)
Outer membrane protein H n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFV1_9PROT
Outer membrane protein H {ECO:0000313|EMBL:CCU61058.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Outer membrane chaperone Skp; K06142 outer membrane protein
SCNpilot_expt_300_bf_scaffold_88_curated_11
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11160..11660
DNA (501bp) protein (167aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; Beta-hydroxyacyl-ACP dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase; K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-]
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Nitrosospira sp. APG3 RepID=M5DEX7_9PROT
SCNpilot_expt_300_bf_scaffold_88_curated_12
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11754..12332
DNA (579bp) protein (193aa)
ribonuclease H (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4]
Ribonuclease HII {ECO:0000255|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000255|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000255|HAMAP-Rule:MF_00052};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Ribonuclease HII n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=RNH2_NITMU rbh
SCNpilot_expt_300_bf_scaffold_88_curated_13
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12569..13048
DNA (480bp) protein (160aa)
FKBP-type peptidyl-prolyl cis-trans isomerase SlyD {ECO:0000313|EMBL:CCU61054.1}; EC=5.2.1.8 {ECO:0000313|EMBL:CCU61054.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
FKBP-type peptidylprolyl isomerase; K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
FKBP-type peptidyl-prolyl cis-trans isomerase SlyD n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFF7_9PROT
SCNpilot_expt_300_bf_scaffold_88_curated_14
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13104..15704)
DNA (2601bp) protein (867aa)
DNA mismatch repair protein MutS n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=MUTS_NITMU rbh
DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS
DNA mismatch repair protein MutS {ECO:0000255|HAMAP-Rule:MF_00096}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_expt_300_bf_scaffold_88_curated_15
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16260..18968)
DNA (2709bp) protein (903aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DEX6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU61051.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_88_curated_16
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19075..20001)
DNA (927bp) protein (309aa)
Inositol-1-monophosphatase {ECO:0000313|EMBL:CCU61050.1}; EC=3.1.3.25 {ECO:0000313|EMBL:CCU61050.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
inositol-1(or 4)-monophosphatase (EC:3.1.3.25); K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
Inositol-1-monophosphatase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DNL2_9PROT
SCNpilot_expt_300_bf_scaffold_88_curated_17
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20032..20664
DNA (633bp) protein (211aa)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
RNA methyltransferase TrmH; K02533 tRNA/rRNA methyltransferase [EC:2.1.1.-]
tRNA:Cm32/Um32 methyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFT9_9PROT
SCNpilot_expt_300_bf_scaffold_88_curated_18
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20890..21360
DNA (471bp) protein (157aa)
Iron-sulfur cluster regulator IscR n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFL1_9PROT
DNA-binding protein {ECO:0000313|EMBL:KIO50221.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
BadM/Rrf2 family transcriptional regulator; K13643 Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
SCNpilot_expt_300_bf_scaffold_88_curated_19
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21478..22635
DNA (1158bp) protein (386aa)
class V aminotransferase (EC:2.8.1.7); K04487 cysteine desulfurase [EC:2.8.1.7]
Cysteine desulfurase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DEX5_9PROT
Cysteine desulfurase {ECO:0000313|EMBL:KIO50220.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_expt_300_bf_scaffold_88_curated_20
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23053..24609
DNA (1557bp) protein (519aa)
Cytochrome c peroxidase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DNK4_9PROT
Cytochrome B6 {ECO:0000313|EMBL:KIO50217.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
cytochrome c peroxidase
SCNpilot_expt_300_bf_scaffold_88_curated_21
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24709..25764
DNA (1056bp) protein (352aa)
UTP-glucose-1-phosphate uridylyltransferase; K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
UDP-glucose pyrophosphorylase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YB84_NITMU
SCNpilot_expt_300_bf_scaffold_88_curated_22
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25791..26678)
DNA (888bp) protein (296aa)
psd; phosphatidylserine decarboxylase (EC:4.1.1.65); K01613 phosphatidylserine decarboxylase [EC:4.1.1.65]
Phosphatidylserine decarboxylase proenzyme {ECO:0000255|HAMAP-Rule:MF_00662}; EC=4.1.1.65 {ECO:0000255|HAMAP-Rule:MF_00662};; Contains:; Phosphatidylserine decarboxylase alpha chain {ECO:0000255|HAMAP-Rule:MF_00662}; Contains:; Phosphatidylserine decarboxylase beta chain {ECO:0000255|HAMAP-Rule:MF_00662}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=PSD_NITMU rbh
SCNpilot_expt_300_bf_scaffold_88_curated_23
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27111..28979)
DNA (1869bp) protein (623aa)
Lipid A export ATP-binding/permease protein MsbA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFK6_9PROT
Metal ABC transporter permease {ECO:0000313|EMBL:KIO50215.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
ABC transporter-like protein; K06147 ATP-binding cassette, subfamily B, bacterial
SCNpilot_expt_300_bf_scaffold_88_curated_24
unknown

Not on your lists

29195..29635
DNA (441bp) protein (147aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_88_curated_25
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29939..30889)
DNA (951bp) protein (317aa)
AAA ATPase, central region n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YB80_NITMU
AAA ATPase
AAA ATPase, central region {ECO:0000313|EMBL:ABB73991.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_expt_300_bf_scaffold_88_curated_26
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31074..31508)
DNA (435bp) protein (145aa)
ribulose-bisphosphate carboxylase (EC:4.1.1.39); K01602 ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit CbbS n=1 Tax=Nitrosospira sp. (strain 40KI) RepID=Q93A89_NITS4
Ribulose 1,5-bisphosphate carboxylase small subunit {ECO:0000313|EMBL:KIO49631.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_expt_300_bf_scaffold_88_curated_27
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31539..33008)
DNA (1470bp) protein (490aa)
Ribulose bisphosphate carboxylase large chain {ECO:0000256|HAMAP-Rule:MF_01338}; Short=RuBisCO large subunit {ECO:0000256|HAMAP-Rule:MF_01338};; EC=4.1.1.39 {ECO:0000256|HAMAP-Rule:MF_01338};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
rbcL; ribulose bisophosphate carboxylase (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
Ribulose bisphosphate carboxylase large chain n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGM2_9PROT
SCNpilot_expt_300_bf_scaffold_88_curated_28
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33081..34058
DNA (978bp) protein (326aa)
LysR family transcriptional regulator PA5437 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DNJ6_9PROT
LysR family transcriptional regulator PA5437 {ECO:0000313|EMBL:CCU61030.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
LysR family transcriptional regulator
SCNpilot_expt_300_bf_scaffold_88_curated_29
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34086..37244)
DNA (3159bp) protein (1053aa)
RND efflux system, inner membrane transporter CmeB n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFS6_9PROT
RND transporter {ECO:0000313|EMBL:KIO50207.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
SCNpilot_expt_300_bf_scaffold_88_curated_30
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37241..38446)
DNA (1206bp) protein (402aa)
Membrane fusion protein of RND family multidrug efflux pump n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFK1_9PROT
Membrane fusion protein of RND family multidrug efflux pump {ECO:0000313|EMBL:CCU61027.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
secretion protein HlyD; K03585 membrane fusion protein
Displaying items 1-30 of 103 in total

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