ggKbase home page

SCNpilot_expt_300_bf_scaffold_88_curated_10

Organism: scnpilot_dereplicated_Nitrosospira_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 10571..11098

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein H n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFV1_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 82.7
  • Coverage: 168.0
  • Bit_score: 267
  • Evalue 1.30e-68
Outer membrane protein H {ECO:0000313|EMBL:CCU61058.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 168.0
  • Bit_score: 267
  • Evalue 1.80e-68
Outer membrane chaperone Skp; K06142 outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 74.3
  • Coverage: 175.0
  • Bit_score: 252
  • Evalue 1.00e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
TTGACGCAAGTATTATTGGCTCGACTGCGAGTTGCTGCTGCGTGGACTATTTGCGCGGGCATCGGCTGTTCTTTCGTAGCCCAGGCTGATGAAATCAAGATCGGCGTTGTCGATACCGAAAGGGTTCTGGCCGAATCGGCGCCCGCGATACGGGCACTAAGGAAGATAGAAAAGGAATTTCTCCCGCGTGACCAGGAAATCAAGAAGATGGCTACCCAGGCAAAAGCCTTGCAGGATCTTCTGGAAAAGGATGGAAAAACGATGCCGGAGGCTGATAGGCGCGGCAAGGAGCGGGATCTGGCGACACTGAACCGCGAGTATCAGCGTGCTCAGCGGCAGATGCGGGAAGATCTCAGCTTGCGCCAGAACGACGAAGTTGCCACGCTTCAACTAAGCGCAACCAAGGCTATCCAGGTCATCGCGGAAACCGAAAAATACGATCTGATATTGCCATTGCGGGATCTCGTCTACCGCAGCCAGCGCATGGATATCACCGAAAAAGTGATCAAGGCGCTGGCCGACAAGTAG
PROTEIN sequence
Length: 176
LTQVLLARLRVAAAWTICAGIGCSFVAQADEIKIGVVDTERVLAESAPAIRALRKIEKEFLPRDQEIKKMATQAKALQDLLEKDGKTMPEADRRGKERDLATLNREYQRAQRQMREDLSLRQNDEVATLQLSATKAIQVIAETEKYDLILPLRDLVYRSQRMDITEKVIKALADK*