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SCNpilot_expt_300_bf_scaffold_88_curated_23

Organism: scnpilot_dereplicated_Nitrosospira_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(27111..28979)

Top 3 Functional Annotations

Value Algorithm Source
Lipid A export ATP-binding/permease protein MsbA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFK6_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 82.9
  • Coverage: 592.0
  • Bit_score: 965
  • Evalue 3.50e-278
Metal ABC transporter permease {ECO:0000313|EMBL:KIO50215.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 608.0
  • Bit_score: 969
  • Evalue 2.00e-279
ABC transporter-like protein; K06147 ATP-binding cassette, subfamily B, bacterial similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 596.0
  • Bit_score: 963
  • Evalue 4.20e-278

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1869
ATGCGCCCCACCCGCCTGGAAGAACCACCCGCCAACCGAAACGACTGGAAGACCATCCGCAGCCTGCTGCCTTATCTTTGGGAATTCAAAGGAAGGGTCGTTCTCGCATTGTCACTCCTCATCATGGCGAAGCTCGCCAATGTGGGCGTTCCATTGGTGCTGAAGGAAATCATAGACGCTCTTGACCGCCCGCGCGCGCTGATGGCCCTGCCGGTTCTTCTGCTGGCTGGCTATGGCGCGCTGCGCCTGGGCAGTACGCTATTCGGAGAGCTGCGGGATGCGATCTTCGCCAAGGTCACGCAGCGCGCCATACGCCGCGCGGCTATCAATGTATTCAACCACCTGCACGCCTTGTCGCTGCGTTTTCATCTGCAGCGCCAGACAGGGGGCGTATCCCGCGATATCGAGCGCGGATCGCGCGGCATCTCTTTTCTTCTCAATTTCATGCTGTTCAATATCTTGCCGACATTGCTGGAAATCGGGCTGGTTGCGGTCATTCTCCTATCCAGATACAGCACATGGTTCTCGGTGATCATCTTCGGCACCCTGACCGCGTACATCACGCTCACCCTGGTCGTGACAGAGTGGCGCATGATCTTTCGGCGGACGATGAACGACATGGACTCAAAAGCCAATACCCAGGCGATCGACAGCCTGCTGAACTATGAAGCGGTCAAGTACTTCGGCAACGAGGCGTGGGAGACCCGGCGCTATGATGAACATCTGCAAAAATGGGAGATGGCAGCGGTTCGCAACCAGACATCGCTTGCTCTTCTCAACTCCGGGCAGAGCGTCATCATCGCGATAGGAATTACACTCCTGCTTTCGCTGGCGGCGCAGGAGGTTATCCAGGGAACGATGACATTGGGCGATCTGGTGCTGATCAACGCTTTCATGCTGCAACTCTACATGCCGCTGCATTTTCTGGGGTTCGTCTATCGGGAGATCAAACACTCATTGGCCGACATGGAAAAAATGTTCAGCCTGCTGGAAGAGGATGAGGAAATCAAGGACAGCGCCGATGCAATCGAGCTTGCCGGAAACAGTGCCGAGGTTCGCTTCGAAAATGTCGATTTCAGCTATGAACCCAATCGGCAAATTCTATTTGATGTCAGCTTCGAGATTCCTCCAGGCGGTAATGTCGCTGTCGTCGGACACAGCGGATCGGGAAAGTCGACATTGGCCCGGTTGCTGTTTCGCTTCTATGACACAACCTCGGGCAGAATCCTGATAAATGGACAGGACATAAAGGGAGTGACGCAGAAAAGCCTGCGCGCAGCCATTGGAATTGTTCCCCAGGACTCTGTCCTGTTCAACGACACGATTTATTACAATATCGCCTATGGGCGTCCCCATGCAGCCAGGGAGGAGATCATCGCGGCGGCGACGGCGGCGCATATTCACGACTTTATCGAAAGCCTGCCGAAAAAATATGAAACCACGGTGGGGGAGCGCGGCTTGAAACTTTCCGGAGGAGAAAAACAGCGCGTGGCCATAGCGCGTGCGATCCTGAAGAACCCAAGAATACTGATATTTGATGAGGCAACTTCGGCACTGGACTCGAAGTCGGAAAAAGCCATCCAGGCTGAGCTTAAACGTGTCGCCATGCACCGTACCACTTTAACCATCGCCCACAGGCTGTCGACCATAGCGGATGCCGACCAGATACTGGTGATGAGCAATGGCCGTATTATAGAACGTGGCGCTCACCTGGAACTGCTTGCGGCTAATGGCGCTTATGCGCATATGTGGCGGCTTCAGCAGCAGGAAGAACGGGCCCACCTGCAATCGCCGGCGATTTCAGCTGAAGAATCTCTCCCGGCAAACTCGCCCAAGCTTTCGAAGGCCGGGACAATTGACGGCTTCTAG
PROTEIN sequence
Length: 623
MRPTRLEEPPANRNDWKTIRSLLPYLWEFKGRVVLALSLLIMAKLANVGVPLVLKEIIDALDRPRALMALPVLLLAGYGALRLGSTLFGELRDAIFAKVTQRAIRRAAINVFNHLHALSLRFHLQRQTGGVSRDIERGSRGISFLLNFMLFNILPTLLEIGLVAVILLSRYSTWFSVIIFGTLTAYITLTLVVTEWRMIFRRTMNDMDSKANTQAIDSLLNYEAVKYFGNEAWETRRYDEHLQKWEMAAVRNQTSLALLNSGQSVIIAIGITLLLSLAAQEVIQGTMTLGDLVLINAFMLQLYMPLHFLGFVYREIKHSLADMEKMFSLLEEDEEIKDSADAIELAGNSAEVRFENVDFSYEPNRQILFDVSFEIPPGGNVAVVGHSGSGKSTLARLLFRFYDTTSGRILINGQDIKGVTQKSLRAAIGIVPQDSVLFNDTIYYNIAYGRPHAAREEIIAAATAAHIHDFIESLPKKYETTVGERGLKLSGGEKQRVAIARAILKNPRILIFDEATSALDSKSEKAIQAELKRVAMHRTTLTIAHRLSTIADADQILVMSNGRIIERGAHLELLAANGAYAHMWRLQQQEERAHLQSPAISAEESLPANSPKLSKAGTIDGF*