ggKbase home page

SCNpilot_expt_300_bf_scaffold_88_curated_27

Organism: scnpilot_dereplicated_Nitrosospira_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(31539..33008)

Top 3 Functional Annotations

Value Algorithm Source
Ribulose bisphosphate carboxylase large chain {ECO:0000256|HAMAP-Rule:MF_01338}; Short=RuBisCO large subunit {ECO:0000256|HAMAP-Rule:MF_01338};; EC=4.1.1.39 {ECO:0000256|HAMAP-Rule:MF_01338};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 489.0
  • Bit_score: 946
  • Evalue 1.80e-272
rbcL; ribulose bisophosphate carboxylase (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] similarity KEGG
DB: KEGG
  • Identity: 93.5
  • Coverage: 489.0
  • Bit_score: 942
  • Evalue 6.00e-272
Ribulose bisphosphate carboxylase large chain n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGM2_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 489.0
  • Bit_score: 946
  • Evalue 1.30e-272

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1470
ATGAGTCAAGAAATAAAGGGCAAGGAACGCTACAAATCCGGCGTCATTCCATACAAGAAAATGGGTTACTGGGACGCTGATTATGTCCCCAAGGAAACCGATATTATTGCACTTTTTCGCATCACGCCCCAGGAAGGGGTGGATCATGAGGAAGCCGCCGCGGCTGTCGCCGGCGAATCCTCCACCGCAACCTGGACCGTGGTATGGACGGACCGCCTGACCGCCTGCGAACTCTACCGCGCCAAGGCTTATCGTTCCGATCCGGTTCCCAATACCGGCCCGGGCACCAAGACCGAGCAACAGTATTTTGCCTACATCGCCTATGATCTGGATCTGTTCGAGCCGGGCTCCATCGCCAACCTGACTGCCTCCATCATCGGCAACGTTTTCGGCTTCAAGGCAGTGAAAGCGCTGCGCCTGGAAGACATGCACATTCCTGTGGCTTACCTGAAAACCTTCCAGGGGCCCGCCACCGGCGTCGTTGTGGAGCGTGAGCGCCTCGACAAATTCGGCCGTCCGTTGCTGGGCGCCACCACCAAGCCGAAACTGGGGCTTTCCGGCCGCAATTATGGGCGTGTGGTGTACGAAGGGCTCAAGGGCGGCCTGGACTTCATGAAGGATGATGAAAACATCAATTCGCAACCCTTCATGCACTGGCGCGACCGCTTCCTGTATTGCATGGAAGCAGTCAACAGAGCTTCCGCCGCGACGGGCGAAGTCAAGGGCCACTACCTGAACGTCACTGCGGGCACCATGGAAGACATGTACGAGCGCGCAGAATTCGCCAAGTCGCTCGGTTCCGTCATCGTCATGATCGACCTGGTGATCGGCTACACCGCCATCCAGTCGATGGCCAAGTGGGCGCGCAAGAACGACATGATCCTGCACCTGCACCGCGCTGGCAACTCGACCTACTCGCGCCAGAAGAACCATGGCATGAACTTCCGCGTGATCTGCAAATGGATGCGGATGGCGGGAGTGGATCACATCCATGCCGGCACGGTCGTCGGCAAGCTCGAGGGCGACCCCCTCATGATCAAGGGTTTCTACGATACCCTGCGGGAAACCAATACCAAGACCAGCCTGGAACATGGCTTGTTCTTCGATCAGGACTGGGCCTCGCTGAACAAGGTCATGCCGGTTGCTTCGGGCGGCATTCATGCCGGCCAGATGCACCAGTTGCTGGATTATCTCGGCGAAGACGTGATCCTGCAGTTCGGCGGCGGCACCATCGGCCACCCCATGGGTATCCAAGCTGGCGCGGTTGCCAACCGCGTGGCGCTGGAGGCGATGGTCATGGCACGCAACGAAGGTCGCGATTATGTGAAAGAAGGTCCCCAGATTCTCGAAGCAGCTGCCAAGTGGTGCACACCGCTCAAGCAGGCTCTGGACACCTGGAAGGATATCACCTTCAATTACGAATCCACCGACACCGCCGATTTCGTGCCCTCGACCACGGCGAACGTCTAA
PROTEIN sequence
Length: 490
MSQEIKGKERYKSGVIPYKKMGYWDADYVPKETDIIALFRITPQEGVDHEEAAAAVAGESSTATWTVVWTDRLTACELYRAKAYRSDPVPNTGPGTKTEQQYFAYIAYDLDLFEPGSIANLTASIIGNVFGFKAVKALRLEDMHIPVAYLKTFQGPATGVVVERERLDKFGRPLLGATTKPKLGLSGRNYGRVVYEGLKGGLDFMKDDENINSQPFMHWRDRFLYCMEAVNRASAATGEVKGHYLNVTAGTMEDMYERAEFAKSLGSVIVMIDLVIGYTAIQSMAKWARKNDMILHLHRAGNSTYSRQKNHGMNFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMIKGFYDTLRETNTKTSLEHGLFFDQDWASLNKVMPVASGGIHAGQMHQLLDYLGEDVILQFGGGTIGHPMGIQAGAVANRVALEAMVMARNEGRDYVKEGPQILEAAAKWCTPLKQALDTWKDITFNYESTDTADFVPSTTANV*