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SCNpilot_expt_300_bf_scaffold_88_curated_28

Organism: scnpilot_dereplicated_Nitrosospira_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 33081..34058

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator PA5437 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DNJ6_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 301.0
  • Bit_score: 536
  • Evalue 2.10e-149
LysR family transcriptional regulator PA5437 {ECO:0000313|EMBL:CCU61030.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 301.0
  • Bit_score: 536
  • Evalue 2.90e-149
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 300.0
  • Bit_score: 507
  • Evalue 4.30e-141

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 978
ATGTATTTTGATGGATATGATAATATTTTCCTTATATATCATAGTACCCGTGCCGCTGGCTCAATCCTGGCGATGCTGCATATTACCCTGAGACAATTAAAGGTTTTTGAATCTGTCGCCCGCAACCTCAGTTTCTCGCGCGCTGCCGAAGAGCTTTATCTCACCCAGCCAGCTGTATCAATGCAAATCAAGCAATTGGAGGATAATATTAATCTGCCTCTCTTCGAACAGTTGGGCAGGAAGGTGTACCTGACCGATGCCGGCCGGGAGTTATATCATTACAGCCGTATCATTTCCCAGCAACTGGCGGACATGGAGCTCGCGCTGGACGAATTGAAGGGGCTGGACAGGGGCAAGCTCACCATCTCGGTGGTGAGTACCGCCAATTACTTCGCTCCGCATCTGCTCGCCAAGTTCTGCCAGCGCTATAGCGGCATCACGGTCAGTCTCAATGTTGCCAACCGGGAAACTGTGCTGAAGCATCTGGCGGATAATGTCACGGATCTGGCCATCATGGGCCTGCCGCCGGATGGGCTGGATATCGCCACGGAATCATTCATGGAAAATCCGCTGGTTGTCATCGCTCCGCCAACTCATCCACTGTGCGCTCTCCGGCACATCCCGGTGAAAAGGCTGGAGCAGGAAACATTCCTGGTGCGCGAGCCTGGTTCCGGCACGCGCAGCGCGATGGAGCGCTTTTTTTCCGAGCATCATATTTCCATCAACAAAAGCATGGAAACGGATACCAACGAAGCCATCAAGCAGGCAGTCCAGGCAGGAATGGGATTGGGCATCATGTCGCTGCATACCGCCGAGCTGGAGCTGGAGACAAAGCGGCTCCAGATTCTCGATGTCCAGGATTTTCCCATCATGCGCCACTGGCATGTGGTGCATCGCAAGAACAAGCGCCTCTCGAGCGCGGCGCACGCTTTCAGGGAATTCCTGCTGAAGGAAGCGCCGGGCTTGATGCCCGCATGA
PROTEIN sequence
Length: 326
MYFDGYDNIFLIYHSTRAAGSILAMLHITLRQLKVFESVARNLSFSRAAEELYLTQPAVSMQIKQLEDNINLPLFEQLGRKVYLTDAGRELYHYSRIISQQLADMELALDELKGLDRGKLTISVVSTANYFAPHLLAKFCQRYSGITVSLNVANRETVLKHLADNVTDLAIMGLPPDGLDIATESFMENPLVVIAPPTHPLCALRHIPVKRLEQETFLVREPGSGTRSAMERFFSEHHISINKSMETDTNEAIKQAVQAGMGLGIMSLHTAELELETKRLQILDVQDFPIMRHWHVVHRKNKRLSSAAHAFREFLLKEAPGLMPA*