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SCNpilot_expt_300_bf_scaffold_88_curated_26

Organism: scnpilot_dereplicated_Nitrosospira_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(31074..31508)

Top 3 Functional Annotations

Value Algorithm Source
ribulose-bisphosphate carboxylase (EC:4.1.1.39); K01602 ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] similarity KEGG
DB: KEGG
  • Identity: 88.9
  • Coverage: 144.0
  • Bit_score: 277
  • Evalue 1.90e-72
Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit CbbS n=1 Tax=Nitrosospira sp. (strain 40KI) RepID=Q93A89_NITS4 similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 144.0
  • Bit_score: 286
  • Evalue 1.70e-74
Ribulose 1,5-bisphosphate carboxylase small subunit {ECO:0000313|EMBL:KIO49631.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 144.0
  • Bit_score: 287
  • Evalue 8.10e-75

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 435
ATGATGACCAATGTAGGAAACCGTGTCACGCAGGGGCAGTTCTCTTTTCTGCCCCCGCTGACGGACAAGCAGATATCGGCGCAAATCAAGTACGCGCTGAAGAACGGCTGGGCCATCGGTGTGGAATACACCGACGATCCGCATCCGCGCAATACATATTGGGAAATGTTCGGCAACCCGATGTTCGACCTGAAGGATCCTGCCGGCATTCTCTCGGAAATCAATGATTGCCGCAAAACCTATCCGAATCATTACATTCGGGTAACGGCATTCAACTCCACGCGCGGGGTCGAAAGCCCGACCATGTCATACATCGTCAACCGCCCCAAGAACGAGCCGGGTTTCAGGTTGGATCGCCAGGAAACGGATGGCCGTTGCGTTCGCTATACCATTCACTCCTACGCTACCGACAAGCCGGAAGCCGAGCGTTATTGA
PROTEIN sequence
Length: 145
MMTNVGNRVTQGQFSFLPPLTDKQISAQIKYALKNGWAIGVEYTDDPHPRNTYWEMFGNPMFDLKDPAGILSEINDCRKTYPNHYIRVTAFNSTRGVESPTMSYIVNRPKNEPGFRLDRQETDGRCVRYTIHSYATDKPEAERY*