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SCNpilot_expt_300_bf_scaffold_88_curated_17

Organism: scnpilot_dereplicated_Nitrosospira_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 20032..20664

Top 3 Functional Annotations

Value Algorithm Source
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 210.0
  • Bit_score: 315
  • Evalue 5.30e-83
RNA methyltransferase TrmH; K02533 tRNA/rRNA methyltransferase [EC:2.1.1.-] similarity KEGG
DB: KEGG
  • Identity: 72.9
  • Coverage: 218.0
  • Bit_score: 293
  • Evalue 4.80e-77
tRNA:Cm32/Um32 methyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFT9_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 210.0
  • Bit_score: 315
  • Evalue 3.80e-83

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGAAAACGATGGGATTGGACAAGCTCTACCTGGTCAATCCCAGGTCTTTCCCTGACAAGGAGGCTGAAAGACGTGCCGCGGGGGCATGGGAAATACTCCATGCTGCGGTTGTATGCACGAGTCTCGATGAGGCCTTGTGCGGGACCAGCCTGGCCGCGGCTGTCACCGCTCGCCCGCGCGATCTCTCGCATGAGGTGTTCGATGCGCGCCAGGGAGCGCGGGAGGTGCTCGGATATGCCCGGGGAGGCCCGGTAGCGCTGGTTTTCGGCAATGAGACCGCAGGCCTTACAACGGCGGAAGCCAGTAAATGCCAGATTTTTGTCAATATTCCCGCCAATCCGGAATACTCCTCGCTTAACCTCGCCAGCGCGGTACAAGTCATGGTTTACGAATTGCGCATGGCACTGCCGGACGTGTCGTCTTTTTCTCCGCAGCCGGGTCTGGCAGCAACTTTCGACGATATCGAACTGCTTTACCGTCATCTGGAACGTCTGGCGATAAGCAGCGGTTTCCTGAACCTGAAAGAGCCCAAGCGTTTCGAGCAGCGCATGCGGCGGCTGTTCGCGCGGGCGCGCCTTGAAAAAGAAGAAGTCAATATGCTGCGCGGCATATTGAGCGCGCTGGAGAAATAG
PROTEIN sequence
Length: 211
MKTMGLDKLYLVNPRSFPDKEAERRAAGAWEILHAAVVCTSLDEALCGTSLAAAVTARPRDLSHEVFDARQGAREVLGYARGGPVALVFGNETAGLTTAEASKCQIFVNIPANPEYSSLNLASAVQVMVYELRMALPDVSSFSPQPGLAATFDDIELLYRHLERLAISSGFLNLKEPKRFEQRMRRLFARARLEKEEVNMLRGILSALEK*