ggKbase home page

SCNpilot_expt_300_bf_scaffold_88_curated_7

Organism: scnpilot_dereplicated_Nitrosospira_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 5315..6502

Top 3 Functional Annotations

Value Algorithm Source
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 395.0
  • Bit_score: 658
  • Evalue 1.40e-186
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000255|HAMAP-Rule:MF_00183}; Short=DXP reductoisomerase {ECO:0000255|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000255|HAMAP-Rule:MF_00183};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000255|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00183}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (st similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 395.0
  • Bit_score: 658
  • Evalue 6.20e-186
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=DXR_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 395.0
  • Bit_score: 658
  • Evalue 4.40e-186
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira multiformis → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1188
ATGATAACCATTCGTCATATCACCGTCCTCGGCTCTACCGGGAGCATTGGCGTAAGCACGCTGGATGTGGTAGCACGGCATCCCGAGAGATTCCGTGTCGCCGCGCTTACCGCCAATACCAGCGCCAAGGAGATGCTGGAACAGTGCAAGCGCTTCCAGCCACGCTATGCGGTATTGCTGGAAGAAGCCAGTGCGGACTGGTTGCGAACGGAAGTTCGCGCCGCGGGCCTTGCTACCGAAGTCCTGTGGGGTGTTGCGTCGCTCGAAAAAGTGGCTTCGCTGCCTGAAGTCGATATCGTCATGGCGGCGATCGTCGGGGCTGCGGGAATACGGCCCACGTTCGCAGCGGCTGCCACGGGCAAGCATGTACTGCTGGCCAACAAGGAAACAATGGTCATGGCAGGGCGAATTTTTATGGACGTGGTCAAGCAGAACGGAGCCACCCTGCTTCCGATAGATAGCGAGCACAATGCGATTTTTCAGTCGCTGCCGCAGCATTTCAACGGAAACCTGGGACTGGTCGGGGTGCGCCGTATTCTTCTGACCGCCTCCGGGGGGCCGTTTCGCAAAACGCCGCTGAGCTCACTGCAAACGGTTACGCCGAGGCAAGCCTGCGCGCATCCCAACTGGGTCATGGGGCAGAAAATTTCGGTTGATTCGGCCACCATGATGAACAAGGGTCTGGAAGTCATAGAAGCCCATTGGTTGTTCGAAGCAGACCCTGAGCAGATCCAGGTTGTGATCCATCCTCAGAGTATCATCCATTCCATGGTCGAATATATCGATGGCTCAGTGCTGGCTCAGCTCGGAAATCCTGATATGCGTACGCCTATTGCGCACGCGTTGGGTTTTCCCGAGCGCATCGAAACGACGGTCACTCCCCTGGACATGTTCAAGGTGGGACGGCTGGATTTCGAAGCGCCGGACTTCGAGAGGTTTCCCTGCCTGGGGCTTGCTTACAGGGCGTTGGAATCCGGGGGCAATATGCCGGCAGTACTCAATGCGGCCAATGAAGTCGCCGTCGAATCTTTCCTTGGATCCCGCATGCCTTTTACCGCGATTCCCGAAATGATCGGTGACGTGATGCAGAGGGTTGGCCGCAAGGATATCGCTACGCTCAGCGACGTGCTGGCGGCGGATGCAGTGGCGCGTGAGGCCGCGCATGAATGGCTTGCCTGCTTCGCGTAA
PROTEIN sequence
Length: 396
MITIRHITVLGSTGSIGVSTLDVVARHPERFRVAALTANTSAKEMLEQCKRFQPRYAVLLEEASADWLRTEVRAAGLATEVLWGVASLEKVASLPEVDIVMAAIVGAAGIRPTFAAAATGKHVLLANKETMVMAGRIFMDVVKQNGATLLPIDSEHNAIFQSLPQHFNGNLGLVGVRRILLTASGGPFRKTPLSSLQTVTPRQACAHPNWVMGQKISVDSATMMNKGLEVIEAHWLFEADPEQIQVVIHPQSIIHSMVEYIDGSVLAQLGNPDMRTPIAHALGFPERIETTVTPLDMFKVGRLDFEAPDFERFPCLGLAYRALESGGNMPAVLNAANEVAVESFLGSRMPFTAIPEMIGDVMQRVGRKDIATLSDVLAADAVAREAAHEWLACFA*