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SCNpilot_expt_300_bf_scaffold_88_curated_30

Organism: scnpilot_dereplicated_Nitrosospira_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(37241..38446)

Top 3 Functional Annotations

Value Algorithm Source
Membrane fusion protein of RND family multidrug efflux pump n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFK1_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 73.4
  • Coverage: 394.0
  • Bit_score: 594
  • Evalue 6.10e-167
Membrane fusion protein of RND family multidrug efflux pump {ECO:0000313|EMBL:CCU61027.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 394.0
  • Bit_score: 594
  • Evalue 8.60e-167
secretion protein HlyD; K03585 membrane fusion protein similarity KEGG
DB: KEGG
  • Identity: 70.4
  • Coverage: 399.0
  • Bit_score: 577
  • Evalue 3.20e-162

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1206
ATGAACTTGAGCAGAAGCATCATTGTGCAAAGTAGCGTTGGAATGATCCTGGCCTTTTTCGCCGGCTGCGGCGGCAAGCCTCCCACCCCTTCGCCCCAGCCCATGCCCGAGGTGGAAGTGATCACCGTTACTCCCAGGACGGTCCCGGACGAACCGGAGTTCATCGGACGCACCGAAGCCTTTCGTCCCGTGGAAATCCGGGCGCAGATTACCGGCATTATCCAGAAAATCTTTTTTACCGAGGGTCGCAATATCAGAAGGGGCGACAAGCTGTACCTCATCGATCCTGTTCCTTTCCGGGCAGCCTATCTTAGCGCAAAGGGAAGAGTGGCCCAGGCGCAGGCACGCCTGCTGCAGGCGGAACAGGATGTCGCACGGGTCAAGCCCCTGCTTGAAGAGCAGGCTGTCAGCCGAAAAGACGTGGACGATGCCGTCGCGCAGGACCTGGCTGCGCGCGCAACGCTCGAATCCGCGCAAAGCGACCTGGTGAAGGCCGAGTTCGACATGGGAAACACGCTCATCACGGCGCCGGTAAGCGGACGAATCGGACGCAGCCGCTACTATGAAGGACGCCTGATCTCGGCCCAGACCGACTTGCTGACAACCATCGACCAGCTGGATCCCATGTACGTCAATATCAGCGTTCCAGAAAGTTATCTGCTTCGAAGGCGGCGCGAGCTGGCGGAACACAAGGTGGCCAGGCCGGATATTTTTCAGTTGCGCGGGGTCATGACTTTTTCCGATGGCACCATCTACCCTCAGGAAGGGGTGCTGGATTTTGCGGATGTCGGTCTTCGCACGGAAACTGGCATGCTGCAGGGACGTTTCGTATTTCCTAATCCGGAGGGAAATCTCTCTCCGGGGCAATCCTATGTTTATCCCGGACAATTCGTGAAAGTTCGCTTGAAAGGATACATCCGCACGGATGCCATCCTGATTCCGCAGCGCGCGGTCCAGCACGGCCCCAAGGGCGCCTTCGTATACGTGGTCGGCAAGGATGGCAAGGCGGAGCAGCGCCCGATCGACGCAACCATATGGTATGGCGATGAATGGTTGATCGATCAGGGCCTTCAGCCAGGAGAGCAGGTTGTGGTGGAAGGATTCTACCGGATTCAGCCAGGAATCCAGGTCAATGCCATTCCATACCGAGGCACGGATTCCTCCCCCGGCAAGAAGAACGAAGAACCTGGCGGACAAACCTCATGA
PROTEIN sequence
Length: 402
MNLSRSIIVQSSVGMILAFFAGCGGKPPTPSPQPMPEVEVITVTPRTVPDEPEFIGRTEAFRPVEIRAQITGIIQKIFFTEGRNIRRGDKLYLIDPVPFRAAYLSAKGRVAQAQARLLQAEQDVARVKPLLEEQAVSRKDVDDAVAQDLAARATLESAQSDLVKAEFDMGNTLITAPVSGRIGRSRYYEGRLISAQTDLLTTIDQLDPMYVNISVPESYLLRRRRELAEHKVARPDIFQLRGVMTFSDGTIYPQEGVLDFADVGLRTETGMLQGRFVFPNPEGNLSPGQSYVYPGQFVKVRLKGYIRTDAILIPQRAVQHGPKGAFVYVVGKDGKAEQRPIDATIWYGDEWLIDQGLQPGEQVVVEGFYRIQPGIQVNAIPYRGTDSSPGKKNEEPGGQTS*