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SCNpilot_expt_300_bf_scaffold_88_curated_31

Organism: scnpilot_dereplicated_Nitrosospira_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(38964..40472)

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system, outer membrane lipoprotein CmeC n=1 Tax=Nitrosospira sp. APG3 RepID=M5DEX1_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 83.4
  • Coverage: 482.0
  • Bit_score: 782
  • Evalue 2.60e-223
RND efflux system, outer membrane lipoprotein CmeC {ECO:0000313|EMBL:CCU61026.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.4
  • Coverage: 482.0
  • Bit_score: 782
  • Evalue 3.60e-223
RND efflux system outer membrane lipoprotein NodT similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 454.0
  • Bit_score: 744
  • Evalue 2.50e-212

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1509
GTGAACGCATGCTCGAAGTGGCGGCGCGTGGTCTTGCCAACCTGGATGACCTTGCGCCTTGAATCGGGAGGCATCGCCTGCATGGGCCTGCTCCCTGGCCAGCGGGCCGGGACAACAGCTTCCCGCCGCTGGACGCGCCTATTGCTGCTCCCTTCGATATTGTTCCTGGCATCCTGCGCAATGGGGCCGGACTATATCAGGCCGCATGTCGACGCATCCGACAAGTTTCGCATGGCCTACACCGAGGGGCAGTCCATCGCCAACCTTCCCTGGTGGGAACTTCTCAACGACGCGGAACTTCAACGGCTGATCAGGCAGGCCCTCCTCCAGAACAGGGATCTCAAGCAGGCGGTGGCAAGCGTCGAGGAGCTTCAGGCTCGCCTGGGCATCGCGCGCTGGGATTATCTTCCAAAAATGGATATGAACGTCAATGCGCCCGCCTTCGGACGCCTTGGAGGCTTTCTTTTTCCGGGATTCCCGACCCCTTACAGCTACTTCGGCCAGACCACCTTGAACTGGGAAATCGATATCTGGGGCAGGGTGCGGCGCTCCAACGAGGCAGCTCGCGCGGATCTGCTTGCGCGCGAGGAAAATCGCCGTGCAATCGTTCTTACCGTGGTGAGTTCCGTCGCACAATCCTATTTCGATCTCCTGCAGTTCGATATGCAATTGGACATTGCCCGAAATGCGCTGCAATCCTGGGAGGAGTCGGTAGCCCTCTCCCGGGCACAACTGCGCGGAGGGGTGATCTCCCGCCTGGATCTGGACCAGTTCGAGGCAGAGCGCGCCAATGCGGCGACTCGCGTGGCGGAACTCGAGCGGCAAATGGTTCAGAAGGAAAATGAGCTGAGCGTGCTGGTTGGGAAAAACCCGGTTTCCATTTCAAGAGGCCGGTCGCTGACGAGTCAGATAGTTCCCCCGGAGGTTCCCGCAGGCCTTCCTTCCGAGTTATTGCAGCGCCGCCCCGATATTCTGCAGGCGGAACAAACGCTGGCAGCGGCTACGGCCCGGATAGGCATGACCAAGGCGGCGCGGTTTCCCAGGTTGACCATCACGGGTTTCCTGGGTGTCGCCAGTCCGGCCTTGTCGAAAATTCTGCTCTCTGGTAGCGAGTTCGGGGTGGGAGGGCTCGGGCTGGCAGGGCCGCTGCTCAATGCGCAAAGCCTGGGCTTCGAACAGCGCGCGGTGGAGGCCCAGGCAAGGCAGGTTCTGGCCCAGTACGAGCAAACGATTCTGGTGGCATTCAAGGAGGTCGAAGATGCGCTGGTCGCGGTTCGTACGGTTACTGAACAGCAAAAAGCCCAGGAGCAGCAGGTTAAGTCGCTACGCTCGGCCTTGCATGTCGCCGATTTACGTTACAAGGGAGGCATCACAAGCTATGTCGACGTACTTCTCGCAAAACGTACTCTTTTCGACGCTGAATTCGCCCTTGCAGCAACGCGCCGCCTGCATCTCGTATCGGTCGTTCAGCTCTACCGTGCCCTCGGCGGAGGATGGTCGCCCGCCTGA
PROTEIN sequence
Length: 503
VNACSKWRRVVLPTWMTLRLESGGIACMGLLPGQRAGTTASRRWTRLLLLPSILFLASCAMGPDYIRPHVDASDKFRMAYTEGQSIANLPWWELLNDAELQRLIRQALLQNRDLKQAVASVEELQARLGIARWDYLPKMDMNVNAPAFGRLGGFLFPGFPTPYSYFGQTTLNWEIDIWGRVRRSNEAARADLLAREENRRAIVLTVVSSVAQSYFDLLQFDMQLDIARNALQSWEESVALSRAQLRGGVISRLDLDQFEAERANAATRVAELERQMVQKENELSVLVGKNPVSISRGRSLTSQIVPPEVPAGLPSELLQRRPDILQAEQTLAAATARIGMTKAARFPRLTITGFLGVASPALSKILLSGSEFGVGGLGLAGPLLNAQSLGFEQRAVEAQARQVLAQYEQTILVAFKEVEDALVAVRTVTEQQKAQEQQVKSLRSALHVADLRYKGGITSYVDVLLAKRTLFDAEFALAATRRLHLVSVVQLYRALGGGWSPA*