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SCNpilot_expt_300_bf_scaffold_564_curated_26

Organism: scnpilot_dereplicated_Nitrosospira_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 12511..13137

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKE4_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 208.0
  • Bit_score: 401
  • Evalue 6.70e-109
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000313|EMBL:KIO47978.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 208.0
  • Bit_score: 405
  • Evalue 5.00e-110
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 91.3
  • Coverage: 208.0
  • Bit_score: 394
  • Evalue 2.60e-107

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
GTGGCTAGAAATCTAGATCCCAAGTGCCGTCAGTGTCGCCGCGAAGGAGAGAAGCTGTTTTTGAAAGGCGAAAAATGCTTCACTGAAAAGTGCGCAATCGAACGCCGGAATTATGCGCCAGGCCAGCATGGCCAGAAAAGCGGACGGTTGTCTGATTATGGCGTGCAGTTGCGGGAAAAACAGAAACTGCGCCGTATATATGGAATCCTGGAGCGCCAGTTTCGTAATAACTATGAGCTGGCCGACCAGCAGCGCGGCATCACCGGGGAGAATCTGCTTCAGTTGCTGGAATGCCGCCTCGATTCGGTTTCCTATCGGATGGGTTTCGGGGCGTCCCGATCGGAAGCACGGCAGATTGTACGGCACAACGGAGTGCTGGTGAATGGCCGCAGGGTTAATATTCCTTCTTATCAGGTAAAGCCGGGCGACGTGATAGAGGTTGCGGAGAAAGCAAAAGGCCACCTGCGTATCAAGGCTGCGGTGGAAGCTGCGGAACATCGTACTTTTCCCGAGTGGATAGAGATGGATGTCAAAGCAATGAAGGGAACATTCAAGGCCAAGCCCGAACGTTCGGATCTGCCTGCGAGCATCAATGAATCGCTAGTAATAGAACTGTACTCGAAGTAA
PROTEIN sequence
Length: 209
VARNLDPKCRQCRREGEKLFLKGEKCFTEKCAIERRNYAPGQHGQKSGRLSDYGVQLREKQKLRRIYGILERQFRNNYELADQQRGITGENLLQLLECRLDSVSYRMGFGASRSEARQIVRHNGVLVNGRRVNIPSYQVKPGDVIEVAEKAKGHLRIKAAVEAAEHRTFPEWIEMDVKAMKGTFKAKPERSDLPASINESLVIELYSK*