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SCNpilot_expt_300_bf_scaffold_1317_curated_3

Organism: scnpilot_dereplicated_Nitrosospira_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(2344..4461)

Top 3 Functional Annotations

Value Algorithm Source
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 455.0
  • Bit_score: 661
  • Evalue 1.00e-186
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 454.0
  • Bit_score: 641
  • Evalue 4.10e-181
Serine--tRNA ligase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DRD4_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 73.5
  • Coverage: 453.0
  • Bit_score: 650
  • Evalue 1.60e-183

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2118
ATGCTGGATATTCAATTGTTGCGCACCGACCCGGGGGGAACCGCGGAACGCCTCGCCAGGCGTGGCTTCCTCCTGGATATTGCCGGATTCGAAATTCTGGAAACGAAGCGCAAGGACTTGCAGACCCGGACCCAGGAATTGCAGGCGCGGCGCAACGCCCTGTCCCGGCAGATCGGCAATGCCAAGTCCAGAGGAGAGGATGCAAATTCTTTCATGGCGGAAGTCTCCGGCCTCGGGGACGAGCTGGCTCGGAATGCGGCCGAGCTGGAAGGAATTCAAAGCGAGTTGCAGCAGATATTGCTGCAAATGCCAAACCTGCCGCACCACAGCGTTCCCGAGGGGAATAGCGAAACCGATAACCGGGAGGTGCGGCGCTGGGGAACACTGCCTTCATTCGATTTTCCGGTAAATGATCATGTAAGCATAGGCGAGAATCTCGGGTTGCTGGACTTCGCGACCGCTGCCAAACTGACCGGCTCGCGTTTCAGCCTGATGACCGGGGGCCTTGCGCGCCTTCACCGGGCGCTGGCGCAGTTCATGCTGGACGTCCAGACGCAGGAGCACGGGTACATGGAAGCGTATGTGCCTTATCTGGTCAATGCGGAAAGCCTGCGGGGTACCGGGCAACTGCCGAAATTCGAAAATGATTCATTTAAAATTTACCACCAGAAAGATGAGCCGGGCGAAGGCGTGCCGGAATCCGCAAAGGCCGCGCAGGGAGAGTTGCACGCCGGAGGCGGCTCTTCGGCTCGGGAAGAAGACTGGTACTTGATCCCGACCTCGGAAGTTCCGCTGACCAACACCGTGCGCGATCAGATCATTGCCCTGGAGGCCTTGCCCGTCAAGCTCACCGCGCATACGCCGTGCTTCCGCTCCGAGGCGGGCAGTTATGGCAGGGACACGCGCGGAATGATTCGCCAGCATCAGTTCGATAAAGTGGAACTGGTGCAGATCGTGCATCCGCAAAGCTCGTATGACGTTCTGGAGGAGCTTGCCGGCCATGCTGAAAAAATTTTGCAGAAACTGGAACTGCCTTATCGGGTAATGCTGTTATGTACCGCCGATATGGGTTTTTCGGCAGCCAAGACCTACGACATCGAAGTGTGGCTGCCAGCGCAAAACGCCTACCGCGAGATTTCCTCGTGCAGCAACTGCGAGGCTTTCCAGGCGCGGCGCATGCAGGCGCGCTTCCGTAACGAAAAAGGTAAAACGGAGCTGCTGCATACGCTGAACGGATCGGGACTGGCGGTAGGGCGCACGCTGGTGGCGATTCTGGAGAACTTTCAGAATGCCGATGGCAGCATATCCATTCCTCGCGTGCTGCAACCATACATGGGCGGAATGGATCGGCTTGCCCGGGGGCAGAAAACTAATTCAAACCGGCCAATTTCTCATTCCAGGGAGAGTTTTATCATGCAAGGCAAATCTGACAGCAAACCCATCCACAAGAGCGGGAAAGCATCGGCGCTCGAATCCGAGGTGCGGGAGGCTATCGCCCATGGGAATAATGTCCAGCAGGCGGTACGGGATTTAACGGTCAAGGCGCTCAGTACCCGGCCCGATTTCGAATCTCTTCGCCATATCCTTACTGCAGTGATGCAGGGAGTGCGCGAAGGCGCCCAGCAAAGGATGCAGAATAATTCCGGGGAGACCCATGCAGTGCTGGAATCCATTCGCGACGCGGTTGCCGGGCTGGATACGGCACTGGCGCAGTTTGCAGAAGCATCGAAGCTGGCTCTGGAGGAGGCCGCCGGCCGGGCCCAGAAGTTTTCCAGCGAGGAACTTGCGCATCTGCGTTCCGAACTGGAAAGCATCGAGCATCTTTTCTTTGAAGTGGTGCAGGCTTCCGCTTCCAGCGCTCAGCAAGCCGTGTCGGAAACTTTGCGCGACTTCGTGACACATGCAAAGCGCAACGGTACCGCGGTCGGGTCTCAGCTGGAGGATACGCTGACGGCTTTCAATCGTGAGATAAGCTCGACCGGGCGCGTGGGACTGGAAACCGGCGTAAGGTTGACGCATGCGATTACCGAACTCATGCGCCAGGTCGCGACCGGAATGCTAAGCGGCGTGGCCGAACGCGTCAAATCCGGACGTAAGCCTTCCGATCGTCGCTCATGA
PROTEIN sequence
Length: 706
MLDIQLLRTDPGGTAERLARRGFLLDIAGFEILETKRKDLQTRTQELQARRNALSRQIGNAKSRGEDANSFMAEVSGLGDELARNAAELEGIQSELQQILLQMPNLPHHSVPEGNSETDNREVRRWGTLPSFDFPVNDHVSIGENLGLLDFATAAKLTGSRFSLMTGGLARLHRALAQFMLDVQTQEHGYMEAYVPYLVNAESLRGTGQLPKFENDSFKIYHQKDEPGEGVPESAKAAQGELHAGGGSSAREEDWYLIPTSEVPLTNTVRDQIIALEALPVKLTAHTPCFRSEAGSYGRDTRGMIRQHQFDKVELVQIVHPQSSYDVLEELAGHAEKILQKLELPYRVMLLCTADMGFSAAKTYDIEVWLPAQNAYREISSCSNCEAFQARRMQARFRNEKGKTELLHTLNGSGLAVGRTLVAILENFQNADGSISIPRVLQPYMGGMDRLARGQKTNSNRPISHSRESFIMQGKSDSKPIHKSGKASALESEVREAIAHGNNVQQAVRDLTVKALSTRPDFESLRHILTAVMQGVREGAQQRMQNNSGETHAVLESIRDAVAGLDTALAQFAEASKLALEEAAGRAQKFSSEELAHLRSELESIEHLFFEVVQASASSAQQAVSETLRDFVTHAKRNGTAVGSQLEDTLTAFNREISSTGRVGLETGVRLTHAITELMRQVATGMLSGVAERVKSGRKPSDRRS*