ggKbase home page

SCNpilot_expt_300_bf_scaffold_1317_curated_4

Organism: scnpilot_dereplicated_Nitrosospira_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(4534..5817)

Top 3 Functional Annotations

Value Algorithm Source
Recombination protein MgsA n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCN4_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 437.0
  • Bit_score: 679
  • Evalue 2.60e-192
Recombination factor protein RarA {ECO:0000313|EMBL:KIO47981.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 436.0
  • Bit_score: 686
  • Evalue 2.30e-194
recombination factor protein RarA; K07478 putative ATPase similarity KEGG
DB: KEGG
  • Identity: 77.8
  • Coverage: 437.0
  • Bit_score: 679
  • Evalue 8.30e-193

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1284
GTGACTGACCTGTTTGGGATGCGCGAGCCTTCCGCGCCGCTCGCGGAAAAATTGCGTCCTCAAGCACTGAAAGACGTAGTAGGCCAATCTCATTTGCTTGAAGCCGGCAAGCCGCATTCCATGATTCTCTGGGGCCCGCCGGGGACAGGCAAGACGACACTGGCCCGCCTCATGGCAGCGGTATTCGATGCGGAATTTATCGCGCTGTCCGCGGTCTTGTCCGGCGTGAAGGATATCCGTGAGGCAGTGGAACGCGCCCAGGCTATCCTGCAGCAATCCGGGCGGCACACCATCCTGTTTGTCGACGAGGTGCACCGCTTCAATAAATCCCAGCAGGATGCGTTCCTGCCCTATGTCGAACAAGGGTTGGTGACATTTGTCGGCGCTACTACCGAAAACCCTTCGTTTGAAGTGAATGGCGCATTGTTGTCGCGTGCGCAAGTGTATGTGCTCAACCCGCTGTCGGACGATGAGCTCGGGATCGTGTTCGAGCGTGCGCGCAATCTCGCGCTGCCGGACCTGGATTTCACGGGGGATGCGAAACGCCTGTTGATCGGGTACGCTGACGGCGATGCTCGTCGCCTGCTCAATTTTCTCGAGCAGATAAAAACGGCGGCGGCAACCGAAGGCATTGCCGCAATAGACAGGGAGTATGCGCAAGCTGCGCTCTCTCCCGGCGGGCGCCGCTTCGACAAGGGAGGTGACAACTTCTATGACCAGATTTCCGCCCTGCACAAATCGGTTCGCGGCTCCAATCCGGATGCCGCGCTTTACTGGACATGCCGGATGCTCGACGCGGGAGCCGATCCGCGTTACATCGCGCGCCGTCTCATTCGCGCCGCGGCGGAAGACATCGGCCTGGCTGATCCCCGCGCACTGCAGATCGCATTGAATGCAAGCGAAACTTATGAGCGCCTCGGCAGTCCCGAAGGGGAACTGGCGCTGGCGCAGGCAGCCCTGTATCTTGCTTGCGCTCCCAAGAGCAATGCCGCCTATCTTGCGTATAATGAAGCGAGAGCTTTCATAGCTGGCGACAAGTCGCGGCCTGTCCCGGAACATTTGCGAAACGCACCCACCCGGCTGATGAAGGAGCTGGGTTTCGGGCATGGCTACCGGTATGTGCATGACGAACCTGAAGCATACGCCGCCGGAGAGGATTATTTGCCTGAAGGAATGCCGCAGGTCCGGTTTTATCGACCTGCTCCGTACGGTCTTGAGAAAAAAATCGCGGAAAGACTGGACCATCTGCGCGAACTGGACGAACAGGCAAAGAAGCAATCATAG
PROTEIN sequence
Length: 428
VTDLFGMREPSAPLAEKLRPQALKDVVGQSHLLEAGKPHSMILWGPPGTGKTTLARLMAAVFDAEFIALSAVLSGVKDIREAVERAQAILQQSGRHTILFVDEVHRFNKSQQDAFLPYVEQGLVTFVGATTENPSFEVNGALLSRAQVYVLNPLSDDELGIVFERARNLALPDLDFTGDAKRLLIGYADGDARRLLNFLEQIKTAAATEGIAAIDREYAQAALSPGGRRFDKGGDNFYDQISALHKSVRGSNPDAALYWTCRMLDAGADPRYIARRLIRAAAEDIGLADPRALQIALNASETYERLGSPEGELALAQAALYLACAPKSNAAYLAYNEARAFIAGDKSRPVPEHLRNAPTRLMKELGFGHGYRYVHDEPEAYAAGEDYLPEGMPQVRFYRPAPYGLEKKIAERLDHLRELDEQAKKQS*