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SCNpilot_expt_300_bf_scaffold_107_curated_32

Organism: scnpilot_dereplicated_Nitrosospira_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(25539..26267)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor FliA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DQG7_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 242.0
  • Bit_score: 401
  • Evalue 6.00e-109
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.4
  • Coverage: 242.0
  • Bit_score: 401
  • Evalue 8.40e-109
sigma 28 (flagella/sporulation); K02405 RNA polymerase sigma factor for flagellar operon FliA similarity KEGG
DB: KEGG
  • Identity: 71.9
  • Coverage: 242.0
  • Bit_score: 354
  • Evalue 2.00e-95

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 729
ATGTATAACGCAGCAGGTGTCATCGATAGAAAGCCCGCGGTAGCCGAGTACGCTCCGCTGGTGAAACGCATCGCGAACCACATGATGGCGAAGCTGCCGCCCAGCGTGGGAGTGGACGATCTCATCCAGGTAGGAATGATGGGTCTGATGGAGGCGCTGAGCCGCTATGAGGAAACACCGGGAGCGCAATTCGAGACTTATGCGGCCCAGCGTATCCGCGGCGCCATGCTGGATGAATTGCGCCAGACCGACTGGATGCCGCGCAGCGCGCGCAAAAGTATGCGCCAGATCGAGACGGCAGTGCAGGCATTGCAGCATCGCCTCGGCCGTCCGCCCGCGGAAGCGGAAATCGCCGCAGAACTCAAGGTGCCGCTTGCCGATTACCAGCAGATGCTGATGGATGCCCATGGGACCCAGCTCATCCATTACGAGGATTTTGTGAATGAGGGGGATGACGATTTCCTGGAGCGCAACTGCTCCGGCGCCGGGTCCGATCCCCTGGCAAGCCTGCTGAACGACGATTTGCGCGAACTGCTGATTGAGGCGATCGGCGATCTGCCGGAAAGGGAAAAGATGCTGATGGGGCTGTACTACGAGCAGGAGCTGAATTTCAAGGAAATCGGCGCAGTATTGGGCGTATCCGAGTCGAGGGTATGTCAGATTCACAACCAGGCGGTTGCGCGGTTGCGCGCCAAACTCAAGGAGGGAGCATGGACTTCAATAGCATAG
PROTEIN sequence
Length: 243
MYNAAGVIDRKPAVAEYAPLVKRIANHMMAKLPPSVGVDDLIQVGMMGLMEALSRYEETPGAQFETYAAQRIRGAMLDELRQTDWMPRSARKSMRQIETAVQALQHRLGRPPAEAEIAAELKVPLADYQQMLMDAHGTQLIHYEDFVNEGDDDFLERNCSGAGSDPLASLLNDDLRELLIEAIGDLPEREKMLMGLYYEQELNFKEIGAVLGVSESRVCQIHNQAVARLRAKLKEGAWTSIA*