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SCNpilot_expt_300_bf_scaffold_190_curated_30

Organism: scnpilot_dereplicated_Nitrosospira_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(34941..35147)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosos similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 64.0
  • Bit_score: 121
  • Evalue 4.80e-25
DNA-directed RNA polymerase subunit omega; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 85.3
  • Coverage: 68.0
  • Bit_score: 118
  • Evalue 1.20e-24
DNA-directed RNA polymerase subunit omega n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGT9_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 64.0
  • Bit_score: 121
  • Evalue 3.40e-25

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 207
ATGGCACGCATCACCGTTGATGATTGCTTGAAAAAAATTCCCAATCGCTTCGATATGACACTGGTCGCAACCATCCGGGCAAGGCAGCTCTCGATTGGCGGCACACCGATGGTGGAGTCCGCGAGGGACAAGCCGACCGTGATCGCACTGCGCGAGCTTGCCCAAGGAAAGGTGGGAATCGATATTCTCACGATGGGGCATCTGTGA
PROTEIN sequence
Length: 69
MARITVDDCLKKIPNRFDMTLVATIRARQLSIGGTPMVESARDKPTVIALRELAQGKVGIDILTMGHL*