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SCNpilot_expt_300_bf_scaffold_550_curated_3

Organism: scnpilot_dereplicated_Nitrosospira_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 4595..5002

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 136.0
  • Bit_score: 204
  • Evalue 1.10e-49
Ribonuclease VapC n=1 Tax=Cupriavidus basilensis OR16 RepID=H1SI98_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 72.1
  • Coverage: 136.0
  • Bit_score: 204
  • Evalue 7.90e-50
PilT protein-like similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 127.0
  • Bit_score: 176
  • Evalue 4.20e-42

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Taxonomy

Cupriavidus basilensis → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 408
ATGTCCGTACCTAAGGTATTCATCGACAGCAACATTTTGATCTATCTTTTGTCCGCCAATGCAAGCAAGGCCAACCAGGCTGAGGCTGTTGTACGGGCAGGAGGACGAATCAGCGTGCAAGTATTAAACGAAATAGCCAATGTGGCGCTTCGCAAGCTTGGCATGCCATGGAGGGAAATCAATGAAGTGCTGGCTTTGATTCAATCGATATGTCCCGCCGAACCGCTGACTATCGAGACCCACGATCAGGGAAGGTTTATTAGCGAACGGTATGGGCTGAGCGTGTATGACGCAATGATCGTAGCGGCCGCTCTTCTCGCGGGATGCGAAACCTTGTATTCAGAGGATATGCAGGACGGTCTATTCGTAGAGCGCCAGTTACGTATCTGCAATCCATTCGCTACTTGA
PROTEIN sequence
Length: 136
MSVPKVFIDSNILIYLLSANASKANQAEAVVRAGGRISVQVLNEIANVALRKLGMPWREINEVLALIQSICPAEPLTIETHDQGRFISERYGLSVYDAMIVAAALLAGCETLYSEDMQDGLFVERQLRICNPFAT*