name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_300_bf_scaffold_97_curated_1
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(58..933)
|
antirepressor n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037CDC0D
Antirestriction protein ArdC {ECO:0000313|EMBL:AJA11375.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
ardC; antirestriction protein ArdC
|
|
SCNpilot_cont_300_bf_scaffold_97_curated_2
unknown
|
Not on your lists |
1443..2318
|
This feature has no annotations |
|
SCNpilot_cont_300_bf_scaffold_97_curated_3
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2331..3119)
|
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DGS9_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL13473.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
|
|
SCNpilot_cont_300_bf_scaffold_97_curated_4
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3223..4986)
|
UPI0003D68E96 related cluster n=1 Tax=unknown RepID=UPI0003D68E96
Chemotaxis protein {ECO:0000313|EMBL:ETI64275.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_97_curated_5
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4983..6677)
|
UPI0003D5ADE1 related cluster n=1 Tax=unknown RepID=UPI0003D5ADE1
Uncharacterized protein {ECO:0000313|EMBL:ETI64311.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_97_curated_6
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7278..9032
|
UPI0003CEFE0B related cluster n=1 Tax=unknown RepID=UPI0003CEFE0B
Uncharacterized protein {ECO:0000313|EMBL:KFD25689.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_97_curated_7
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9029..9658
|
UPI0003CEB5F9 related cluster n=1 Tax=unknown RepID=UPI0003CEB5F9
Uncharacterized protein {ECO:0000313|EMBL:KFD25690.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
|
|
SCNpilot_cont_300_bf_scaffold_97_curated_8
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9655..12087
|
UPI0003CEEB63 related cluster n=1 Tax=unknown RepID=UPI0003CEEB63
Uncharacterized protein {ECO:0000313|EMBL:KFD25691.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_97_curated_9
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12672..13001
|
hypothetical protein n=1 Tax=Alphaproteobacteria RepID=UPI000262C777
Uncharacterized protein {ECO:0000313|EMBL:KEZ12087.1}; Flags: Precursor;; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_97_curated_10
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13075..14337
|
transporter n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C778
Transporter {ECO:0000313|EMBL:KEZ12088.1}; Flags: Precursor;; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
heavy metal efflux system protein; K15725 cobalt-zinc-cadmium resistance protein CzcC
|
|
SCNpilot_cont_300_bf_scaffold_97_curated_11
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14341..15507
|
hemolysin D n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036EAE24
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:KEZ16604.1}; Flags: Precursor;; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
RND family efflux transporter MFP subunit; K15727 cobalt-zinc-cadmium resistance protein CzcB
|
|
SCNpilot_cont_300_bf_scaffold_97_curated_12
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15512..18751
|
cation transporter n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C77A
Cation transporter {ECO:0000313|EMBL:KFD26961.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
CzcA family heavy metal efflux pump; K15726 cobalt-zinc-cadmium resistance protein CzcA
|
|
SCNpilot_cont_300_bf_scaffold_97_curated_13
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18822..19316
|
UPI0003D66734 related cluster n=1 Tax=unknown RepID=UPI0003D66734
Uncharacterized protein {ECO:0000313|EMBL:ETI58573.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
|
|
SCNpilot_cont_300_bf_scaffold_97_curated_14
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19406..20020
|
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000317DE79
Scaffold19, whole genome shotgun sequence {ECO:0000313|EMBL:KIS30676.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
|
|
SCNpilot_cont_300_bf_scaffold_97_curated_15
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20025..20663
|
hypothetical protein n=1 Tax=Alphaproteobacteria RepID=UPI000262C77E
Uncharacterized protein {ECO:0000313|EMBL:KFL44937.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. ba1.;"
|
|
SCNpilot_cont_300_bf_scaffold_97_curated_16
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20660..23131
|
Heavy metal translocating P-type ATPase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S7D5_9SPHN
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:AGH50424.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
heavy metal translocating P-type ATPase
|
|
SCNpilot_cont_300_bf_scaffold_97_curated_17
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23138..23821
|
Transporter n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EJI6_9SPHN
Transporter {ECO:0000313|EMBL:EHJ58513.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
transporter; K07238 zinc transporter, ZIP family
|
|
SCNpilot_cont_300_bf_scaffold_97_curated_18
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24003..24854
|
membrane protein n=1 Tax=Alphaproteobacteria RepID=UPI000262C781
Membrane protein {ECO:0000313|EMBL:KFD26954.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein; K08994 putative membrane protein
|
|
SCNpilot_cont_300_bf_scaffold_97_curated_19
unknown
|
Not on your lists |
24854..25957
|
This feature has no annotations |
|
SCNpilot_cont_300_bf_scaffold_97_curated_20
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26206..26943
|
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002E7AF4D
LuxR family transcriptional regulator {ECO:0000313|EMBL:KEQ53292.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
LuxR family transcriptional regulator
|
|
SCNpilot_cont_300_bf_scaffold_97_curated_21
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27029..27673
|
Acyl-homoserine-lactone synthase {ECO:0000256|RuleBase:RU361135}; EC=2.3.1.184 {ECO:0000256|RuleBase:RU361135};; Autoinducer synthesis protein {ECO:0000256|RuleBase:RU361135}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. ba1.;"
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00030E56B9
luxI; N-acyl-L-homoserine lactone synthetase
|
|
SCNpilot_cont_300_bf_scaffold_97_curated_22
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27685..28581
|
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002EF4096
Uncharacterized protein {ECO:0000313|EMBL:KEQ53294.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_97_curated_23
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28578..29189
|
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002EE891F
Uncharacterized protein {ECO:0000313|EMBL:AHE55572.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
GntR family transcriptional regulator
|
|
SCNpilot_cont_300_bf_scaffold_97_curated_24
unknown
|
Not on your lists |
29315..29455
|
This feature has no annotations |
|
SCNpilot_cont_300_bf_scaffold_97_curated_25
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29521..30195
|
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CMU4_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:AHE55570.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_97_curated_26
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30195..31976
|
asparagine synthase (EC:6.3.5.4)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CNY3_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:AHE55569.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
|
|
SCNpilot_cont_300_bf_scaffold_97_curated_27
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(32009..34135)
|
Acylaminoacyl-peptidase n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NEQ6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AHE55568.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
putative peptidase
|
|
SCNpilot_cont_300_bf_scaffold_97_curated_28
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(34168..36768)
|
TonB-dependent receptor n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NEQ5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AHE55567.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
TonB-dependent receptor-like protein
|
|
SCNpilot_cont_300_bf_scaffold_97_curated_29
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(36835..37917)
|
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9D7T9_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:AHE55566.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
fecR; Fe2+-dicitrate sensor membrane component; K07165 transmembrane sensor
|
|
SCNpilot_cont_300_bf_scaffold_97_curated_30
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(37917..38495)
|
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CMT9_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:AHE55565.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
|