name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_300_bf_scaffold_305_curated_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..1607)
|
Putative methylase/helicase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VGF7_SPHWW
Uncharacterized protein {ECO:0000313|EMBL:GAO52904.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
putative methylase/helicase
|
|
SCNpilot_cont_300_bf_scaffold_305_curated_2
Sphingomonas sp. KA1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1756..2505)
|
Possible arsH protein n=1 Tax=Sphingomonas sp. KA1 RepID=Q0KJB9_9SPHN
Possible arsH protein {ECO:0000313|EMBL:BAF03423.1}; TaxID=164608 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. KA1.;"
NADPH-dependent FMN reductase
|
|
SCNpilot_cont_300_bf_scaffold_305_curated_3
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2562..3614)
|
Arsenical-resistance protein ACR3 n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MJ55_9SPHN
Arsenical-resistance protein ACR3 {ECO:0000313|EMBL:CCW16799.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
arsenical-resistance protein; K03325 arsenite transporter, ACR3 family
|
|
SCNpilot_cont_300_bf_scaffold_305_curated_4
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3611..4117)
|
Protein tyrosine phosphatase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XEG5_NOVAD
protein tyrosine phosphatase
Protein tyrosine phosphatase {ECO:0000313|EMBL:ABP64326.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|
|
SCNpilot_cont_300_bf_scaffold_305_curated_5
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4128..4562)
|
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
arsenate reductase; K00537 arsenate reductase [EC:1.20.4.1]
Putative arsenate reductase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z741_9SPHN
|
|
SCNpilot_cont_300_bf_scaffold_305_curated_6
unknown
|
Not on your lists |
comp(4596..4949)
|
This feature has no annotations |
|
SCNpilot_cont_300_bf_scaffold_305_curated_7
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5050..5556)
|
ArsR family transcriptional regulator n=2 Tax=Sphingobium RepID=T0I0K8_9SPHN
protein-tyrosine phosphatase
Tax=GWF1_Sphingomonadales_63_6_curated
|
|
SCNpilot_cont_300_bf_scaffold_305_curated_8
Sphingomonas sp. KA1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5553..5915)
|
Putative transcriptional regulator, ArsR n=1 Tax=Sphingomonas sp. KA1 RepID=Q0KJB5_9SPHN
Putative transcriptional regulator, ArsR {ECO:0000313|EMBL:BAF03427.1}; TaxID=164608 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. KA1.;"
ArsR family transcriptional regulator
|
|
SCNpilot_cont_300_bf_scaffold_305_curated_9
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6373..7428
|
Transporter n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MJ50_9SPHN
permease; K07089
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
|
|
SCNpilot_cont_300_bf_scaffold_305_curated_10
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7440..7676
|
Redox-active disulfide protein 2 n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MMU3_9SPHN
thiol-disulfide isomerase and thioredoxins
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
|
|
SCNpilot_cont_300_bf_scaffold_305_curated_11
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7677..8747
|
Monooxygenase, putative n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MMH4_9SPHN
Monooxygenase, putative {ECO:0000313|EMBL:CCW16792.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
flavin-containing monooxygenase
|
|
SCNpilot_cont_300_bf_scaffold_305_curated_12
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8792..9082)
|
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZBR6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD58008.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_305_curated_13
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9087..9734)
|
ParA-like protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZCS8_9SPHN
ParA-like protein {ECO:0000313|EMBL:EGD57612.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
ParA-like protein; K03496 chromosome partitioning protein
|
|
SCNpilot_cont_300_bf_scaffold_305_curated_14
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9817..11022)
|
Putative uncharacterized protein n=2 Tax=Novosphingobium nitrogenifigens RepID=F1ZBR8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD58006.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_305_curated_15
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11658..13232)
|
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049, ECO:0000313|EMBL:CCA91199.1}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049, ECO:0000313|EMBL:CCA91199.1};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
L-aspartate oxidase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IGD3_9SPHN
|
|
SCNpilot_cont_300_bf_scaffold_305_curated_16
unknown
|
Not on your lists |
13509..13733
|
This feature has no annotations |
|
SCNpilot_cont_300_bf_scaffold_305_curated_17
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13771..14715)
|
Multidrug ABC transporter ATP-binding protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HWM3_9SPHN
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:EQB17477.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
antibiotic transport system ATP-binding protein; K09687 antibiotic transport system ATP-binding protein
|
|
SCNpilot_cont_300_bf_scaffold_305_curated_18
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14771..16024)
|
glycosyl transferase family 1 n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI000370ADBC
Glycosyltransferase {ECO:0000313|EMBL:GAO57010.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
glycosyltransferase
|
|
SCNpilot_cont_300_bf_scaffold_305_curated_19
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16347..16550
|
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6D7D8
Uncharacterized protein {ECO:0000313|EMBL:EQB17474.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_305_curated_20
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16615..18042
|
Peptidase U62, modulator of DNA gyrase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z5I0_9SPHN
Peptidase U62, modulator of DNA gyrase {ECO:0000313|EMBL:EGD60090.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
peptidase U62, modulator of DNA gyrase; K03568 TldD protein
|
|
SCNpilot_cont_300_bf_scaffold_305_curated_21
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18123..18578
|
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HHJ9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHK92462.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_305_curated_22
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18728..20287)
|
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Sphingomonas sp. LH128 RepID=J8SQI9_9SPHN
|
|
SCNpilot_cont_300_bf_scaffold_305_curated_23
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20752..22932)
|
TonB-dependent receptor n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NG20_9SPHN
Scaffold13, whole genome shotgun sequence {ECO:0000313|EMBL:KIS31211.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
TonB-dependent receptor-like protein; K02014 iron complex outermembrane recepter protein
|
|
SCNpilot_cont_300_bf_scaffold_305_curated_24
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23061..24512)
|
Peptidase M20 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G329_NOVAD
Peptidase M20:Peptidase dimerisation {ECO:0000313|EMBL:GAO54839.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_305_curated_25
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24629..27190
|
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
DNA gyrase subunit B n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G328_NOVAD
|
|
SCNpilot_cont_300_bf_scaffold_305_curated_26
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27183..27503
|
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G327_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD27746.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|
|
SCNpilot_cont_300_bf_scaffold_305_curated_27
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27773..28423)
|
Uncharacterized protein n=1 Tax=Sphingobium sp. AP49 RepID=J2WQG6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO55904.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_305_curated_28
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28571..29623)
|
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YK80_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD48687.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_305_curated_29
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29616..30572)
|
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
prolipoprotein diacylglyceryl transferase; K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-]
Prolipoprotein diacylglyceryl transferase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z697_9SPHN
|
|
SCNpilot_cont_300_bf_scaffold_305_curated_30
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30735..33488
|
[protein-PII] uridylyltransferase (EC:2.7.7.59); K00990 [protein-PII] uridylyltransferase [EC:2.7.7.59]
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WL27_9SPHN
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000256|HAMAP-Rule:MF_00277}; Bifunctional nitrogen sensor protein {ECO:0000256|HAMAP-Rule:MF_00277}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;"
|