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SCNpilot_cont_300_bf_scaffold_2811_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2811_curated_1
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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45..305
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI000370DA5A
Uncharacterized protein {ECO:0000313|EMBL:EGD59346.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2811_curated_2
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

314..733
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8R1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD59347.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2811_curated_3
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

757..1143
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI0003629230
Uncharacterized protein {ECO:0000313|EMBL:EGD59345.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
SCNpilot_cont_300_bf_scaffold_2811_curated_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1155..1850
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MIA6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO52913.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2811_curated_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1847..2239
DNA (393bp) protein (131aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO52914.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
SCNpilot_cont_300_bf_scaffold_2811_curated_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2236..2493
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316) RepID=E0S3R5_BUTPB
Uncharacterized protein {ECO:0000313|EMBL:GAO52915.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2811_curated_7
Sphingomonas sp. ERG5, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2505..2894)
DNA (390bp) protein (130aa)
twitching motility protein PilT n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6A071
Putative toxin of toxin-antitoxin system {ECO:0000313|EMBL:AGU69291.1}; TaxID=1381597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. ERG5.;"
PilT domain-containing protein
SCNpilot_cont_300_bf_scaffold_2811_curated_8
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2891..3136)
DNA (246bp) protein (82aa)
Transcriptional regulator, AbrB family n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GPX2_SPHAL
AbrB family transcriptional regulator
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:EZP68920.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
SCNpilot_cont_300_bf_scaffold_2811_curated_9
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3376..3753
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z4L3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD60452.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2811_curated_10
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3753..4040
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z4L2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD60451.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
SCNpilot_cont_300_bf_scaffold_2811_curated_11
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4068..4922
DNA (855bp) protein (285aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8S3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD59334.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
TOPRIM domain-containing protein
SCNpilot_cont_300_bf_scaffold_2811_curated_12
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4934..5557)
DNA (624bp) protein (208aa)
Plasmid pRiA4b ORF-3 family protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z4L0_9SPHN
Plasmid pRiA4b ORF-3 family protein {ECO:0000313|EMBL:EGD60449.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
plasmid pRiA4b ORF-3 family protein
SCNpilot_cont_300_bf_scaffold_2811_curated_13
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5661..6647
DNA (987bp) protein (329aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8S4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD59333.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
SCNpilot_cont_300_bf_scaffold_2811_curated_14
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6748..7128
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8S6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD59331.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
hypothetical protein
Displaying 14 items

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