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SCNpilot_cont_300_bf_scaffold_537_curated

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_537_curated_1
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(421..1482)
DNA (1062bp) protein (354aa)
Integrase family protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z476_9SPHN
Integrase family protein {ECO:0000313|EMBL:EGD60486.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
integrase family protein
SCNpilot_cont_300_bf_scaffold_537_curated_2
unknown

Not on your lists

comp(1479..1664)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_537_curated_3
unknown

Not on your lists

comp(2013..2141)
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_537_curated_4
unknown

Not on your lists

comp(2161..2532)
DNA (372bp) protein (124aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_537_curated_5
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2529..2984)
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EFG6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EHJ60011.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_537_curated_6
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2981..3295)
DNA (315bp) protein (105aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EFG7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EHJ60012.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
SCNpilot_cont_300_bf_scaffold_537_curated_7
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3379..3744
DNA (366bp) protein (122aa)
XRE family transcriptional regulator n=1 Tax=Sphingobium lactosutens DS20 RepID=T0J0U0_9SPHN
XRE family transcriptional regulator {ECO:0000313|EMBL:EQB15574.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
SCNpilot_cont_300_bf_scaffold_537_curated_8
unknown

Not on your lists

3801..4148
DNA (348bp) protein (116aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_537_curated_9
unknown

Not on your lists

4458..5771
DNA (1314bp) protein (438aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_537_curated_10
unknown

Not on your lists

5787..6404
DNA (618bp) protein (206aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_537_curated_11
Sutterella wadsworthensis, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6419..7657
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Sutterella wadsworthensis HGA0223 RepID=S3BVM2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EPD98152.1}; TaxID=1203554 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella.;" source="Sutterella wadsworthensis HGA0223.;"
SCNpilot_cont_300_bf_scaffold_537_curated_12
Asticcacaulis benevestitus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7680..9041
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4PKD3_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ88671.1}; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_537_curated_13
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9111..10109)
DNA (999bp) protein (333aa)
UPI0003CFC638 related cluster n=1 Tax=unknown RepID=UPI0003CFC638
Phage late control protein {ECO:0000313|EMBL:ESZ86324.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACIA14H2.;"
Phage protein D
SCNpilot_cont_300_bf_scaffold_537_curated_14
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10109..10564)
DNA (456bp) protein (152aa)
Phage P2 GpU protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z9C9_9SPHN
phage P2 GpU protein; K06906
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
SCNpilot_cont_300_bf_scaffold_537_curated_15
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10564..12543)
DNA (1980bp) protein (660aa)
TP901 family phage tail tape measure protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z9C8_9SPHN
TP901 family phage tail tape measure protein {ECO:0000313|EMBL:EGD58377.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
TP901 family phage tail tape measure protein
SCNpilot_cont_300_bf_scaffold_537_curated_16
unknown

Not on your lists

comp(12540..12677)
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_537_curated_17
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12677..13027)
DNA (351bp) protein (117aa)
UPI0003D05B17 related cluster n=1 Tax=unknown RepID=UPI0003D05B17
Tail fiber protein {ECO:0000313|EMBL:ESZ86322.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACIA14H2.;"
phage tail E family protein
SCNpilot_cont_300_bf_scaffold_537_curated_18
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13150..13650)
DNA (501bp) protein (167aa)
UPI0003D06330 related cluster n=1 Tax=unknown RepID=UPI0003D06330
Major tail tube protein {ECO:0000313|EMBL:ESZ86321.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACIA14H2.;"
major tail tube protein
SCNpilot_cont_300_bf_scaffold_537_curated_19
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13683..14822)
DNA (1140bp) protein (380aa)
UPI0003D032ED related cluster n=1 Tax=unknown RepID=UPI0003D032ED
Tail sheath protein {ECO:0000313|EMBL:ESZ86320.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACIA14H2.;"
phage tail sheath protein; K06907
SCNpilot_cont_300_bf_scaffold_537_curated_20
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14838..15185)
DNA (348bp) protein (116aa)
Putative baseplate assembly protein W n=1 Tax=Phaeobacter inhibens (strain ATCC 700781 / DSM 17395 / CIP 105210 / NBRC 16654 / BS107) RepID=I7DR34_PHAIB
Baseplate assembly protein {ECO:0000313|EMBL:KJH82850.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
baseplate assembly protein W
SCNpilot_cont_300_bf_scaffold_537_curated_21
Erythrobacter sp. SD-21, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16724..17227)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PCQ0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EDL48380.1}; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. SD-21.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_537_curated_22
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17924..18484)
DNA (561bp) protein (187aa)
UPI0003D04591 related cluster n=1 Tax=unknown RepID=UPI0003D04591
Baseplate assembly protein {ECO:0000313|EMBL:ESZ86318.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACIA14H2.;"
putative baseplate assembly protein V (gpv)
SCNpilot_cont_300_bf_scaffold_537_curated_23
unknown

Not on your lists

comp(18658..19200)
DNA (543bp) protein (181aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_537_curated_24
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19197..19799)
DNA (603bp) protein (201aa)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
lysozyme (EC:3.2.1.17)
glycosyl hydrolase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037B19D9
SCNpilot_cont_300_bf_scaffold_537_curated_25
unknown

Not on your lists

comp(19783..20025)
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_537_curated_26
unknown

Not on your lists

comp(20012..20272)
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_537_curated_27
Capsaspora owczarzaki, Capsaspora, Ichthyosporea, Eukaryota

Not on your lists

comp(20272..23442)
DNA (3171bp) protein (1057aa)
Uncharacterized protein n=1 Tax=Lactobacillus kisonensis F0435 RepID=H1LE90_9LACO
Uncharacterized protein {ECO:0000313|EMBL:KJE92902.1}; TaxID=595528 species="Eukaryota; Ichthyosporea; Capsaspora.;" source="Capsaspora owczarzaki (strain ATCC 30864).;"
cell wall surface anchor family protein
SCNpilot_cont_300_bf_scaffold_537_curated_28
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23453..24619)
DNA (1167bp) protein (389aa)
putative phage tail protein n=1 Tax=Sphingomonas elodea RepID=UPI000263171D
Gp32, bacteriophage protein {ECO:0000313|EMBL:EED37629.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_537_curated_29
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24616..25254)
DNA (639bp) protein (213aa)
tail protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B50085
gpI; bacteriophage p2 baseplate assembly protein gpi
Bacteriophage P2 Baseplate assembly protein GPI {ECO:0000313|EMBL:CAQ68884.1}; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis; (strain LMG 19424)).;"
SCNpilot_cont_300_bf_scaffold_537_curated_30
Asticcacaulis biprosthecium, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25244..26092)
DNA (849bp) protein (283aa)
Baseplate J-like family protein n=1 Tax=Asticcacaulis biprosthecum C19 RepID=F4QJC2_9CAUL
Baseplate J-like family protein {ECO:0000313|EMBL:EGF93105.1}; TaxID=715226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis biprosthecum C19.;"
phage-related baseplate assembly protein
Displaying items 1-30 of 42 in total

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