name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_300_bf_scaffold_16_curated_1
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3..131
|
Electron transfer flavoprotein alpha-subunit,(ETFLS) n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EBL9_9SPHN
Electron transfer flavoprotein alpha-subunit,(ETFLS) {ECO:0000313|EMBL:EHJ61301.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
electron transfer flavoprotein subunit alpha; K03522 electron transfer flavoprotein alpha subunit
|
|
SCNpilot_cont_300_bf_scaffold_16_curated_2
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
166..1035
|
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157); K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Novosphingobium sp. AP12 RepID=J2ZNU2_9SPHN
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:EJL21001.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
|
|
SCNpilot_cont_300_bf_scaffold_16_curated_3
unknown
|
Not on your lists |
1066..1179
|
This feature has no annotations |
|
SCNpilot_cont_300_bf_scaffold_16_curated_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1257..1952)
|
Putative transposase n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4YY48_SPHJU
Mobile element protein {ECO:0000313|EMBL:GAO52989.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
transposase
|
|
SCNpilot_cont_300_bf_scaffold_16_curated_5
unknown
|
Not on your lists |
comp(2311..2496)
|
This feature has no annotations |
|
SCNpilot_cont_300_bf_scaffold_16_curated_6
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2493..3272)
|
Beta-lactamase-like protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EJ03_9SPHN
Beta-lactamase-like protein {ECO:0000313|EMBL:EHJ58762.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
beta-lactamase-like protein; K06167 PhnP protein
|
|
SCNpilot_cont_300_bf_scaffold_16_curated_7
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3269..4042)
|
TatD-related deoxyribonuclease; K03424 TatD DNase family protein [EC:3.1.21.-]
LuxR family transcriptional regulator n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HRG8_9SPHN
TatD-related deoxyribonuclease {ECO:0000313|EMBL:KHS48535.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
|
|
SCNpilot_cont_300_bf_scaffold_16_curated_8
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4042..5586)
|
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
Methionine--tRNA ligase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VTP3_9SPHN
|
|
SCNpilot_cont_300_bf_scaffold_16_curated_9
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5688..6638)
|
DNA polymerase III subunit delta {ECO:0000313|EMBL:KHS48533.1}; EC=2.7.7.7 {ECO:0000313|EMBL:KHS48533.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
DNA polymerase III subunit delta' (EC:2.7.7.7); K02341 DNA polymerase III subunit delta' [EC:2.7.7.7]
DNA polymerase III subunit delta n=1 Tax=Sphingomonas sp. LH128 RepID=J8SMH6_9SPHN
|
|
SCNpilot_cont_300_bf_scaffold_16_curated_10
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6635..7276)
|
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Thymidylate kinase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6Z2_NOVAD
|
|
SCNpilot_cont_300_bf_scaffold_16_curated_11
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7276..8526)
|
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4); K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VMN6_9SPHN
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:EZP83482.1}; Flags: Precursor;; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
|
|
SCNpilot_cont_300_bf_scaffold_16_curated_12
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8611..9867)
|
Putative rare lipoprotein A n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NAF8_ERYLH
Rare lipoprotein A {ECO:0000313|EMBL:GAO56102.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
rare lipoprotein A; K03642 rare lipoprotein A
|
|
SCNpilot_cont_300_bf_scaffold_16_curated_13
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9851..10909)
|
Lytic murein transglycosylase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6Y9_NOVAD
Membrane-bound lytic murein transglycosylase B {ECO:0000313|EMBL:GAO56103.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
lytic murein transglycosylase
|
|
SCNpilot_cont_300_bf_scaffold_16_curated_14
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11755..12768
|
D-threo-aldose 1-dehydrogenase; K00064 D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein n=1 Tax=Sphingobium sp. AP49 RepID=J2WHE6_9SPHN
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein {ECO:0000313|EMBL:EJK82298.1}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
|
|
SCNpilot_cont_300_bf_scaffold_16_curated_15
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12895..13740
|
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VK35_CAUST
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ADG10858.1}; Flags: Precursor;; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
|
|
SCNpilot_cont_300_bf_scaffold_16_curated_16
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13767..14183
|
Uncharacterized protein n=1 Tax=Sphingobium sp. AP49 RepID=J2WHW7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJK82300.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
antibiotic biosynthesis monooxygenase
|
|
SCNpilot_cont_300_bf_scaffold_16_curated_17
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14234..15139)
|
Transcriptional regulator, LysR family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IE68_XANP2
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABS66311.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
|
|
SCNpilot_cont_300_bf_scaffold_16_curated_18
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15431..16690
|
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI000379F17E
permease
Permease protein {ECO:0000313|EMBL:ACM30795.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
|
|
SCNpilot_cont_300_bf_scaffold_16_curated_19
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16731..17144
|
Polyketide cyclase / dehydrase and lipid transport n=1 Tax=Novosphingobium sp. AP12 RepID=J2PZW9_9SPHN
Polyketide cyclase / dehydrase and lipid transport {ECO:0000313|EMBL:EJL33407.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_16_curated_20
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17418..18362)
|
Transcriptional regulator, AraC family n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZHR7_GLUDA
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACI52545.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
|
|
SCNpilot_cont_300_bf_scaffold_16_curated_21
Acidomonas methanolica, Acidomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18423..19172
|
dehydrogenase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B58D51
Oxidoreductase/short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:GAJ28752.1}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas methanolica NBRC 104435.;"
short-chain dehydrogenase/reductase SDR
|
|
SCNpilot_cont_300_bf_scaffold_16_curated_22
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19424..21658
|
histidine kinase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6E5B4
Uncharacterized protein {ECO:0000313|EMBL:AJP74290.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
diguanylate cyclase/phosphodiesterase
|
|
SCNpilot_cont_300_bf_scaffold_16_curated_23
unknown
|
Not on your lists |
21891..22505
|
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003630F82
|
|
SCNpilot_cont_300_bf_scaffold_16_curated_24
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22906..24270)
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
two-component system sensor histidine kinase CpxA n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC9F4
cpxA; two-component system sensor histidine kinase CpxA
|
|
SCNpilot_cont_300_bf_scaffold_16_curated_25
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24276..24998)
|
transcriptional regulator n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC9F5
Uncharacterized protein {ECO:0000313|EMBL:AHE56271.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
ompR; two-component system phosphate regulon response regulator OmpR; K02483 two-component system, OmpR family, response regulator
|
|
SCNpilot_cont_300_bf_scaffold_16_curated_26
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25161..25556
|
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC9F6
Uncharacterized protein {ECO:0000313|EMBL:CCW15740.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_16_curated_27
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25625..26050
|
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S2P8_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH50305.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
|
|
SCNpilot_cont_300_bf_scaffold_16_curated_28
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26193..27758)
|
Benzoylformate decarboxylase {ECO:0000313|EMBL:KHL24901.1}; EC=4.1.1.7 {ECO:0000313|EMBL:KHL24901.1};; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
benzoylformate decarboxylase; K01576 benzoylformate decarboxylase [EC:4.1.1.7]
Benzoylformate decarboxylase n=1 Tax=Burkholderia multivorans (strain ATCC 17616 / 249) RepID=A9AGG7_BURM1
|
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SCNpilot_cont_300_bf_scaffold_16_curated_29
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27768..28823)
|
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase {ECO:0000313|EMBL:GAO54732.1}; EC=4.1.1.45 {ECO:0000313|EMBL:GAO54732.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
amidohydrolase; K14333 2,3-dihydroxybenzoate decarboxylase [EC:4.1.1.46]
amidohydrolase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B519D0
|
|
SCNpilot_cont_300_bf_scaffold_16_curated_30
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28911..31286)
|
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000372227B
Colicin I receptor {ECO:0000313|EMBL:AKH42954.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
TonB-dependent receptor
|