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SCNpilot_cont_300_bf_scaffold_1011_curated_21

Organism: scnpilot_dereplicated_Novosphingobium_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 18132..19232

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway, VirB10 component n=1 Tax=Novosphingobium sp. AP12 RepID=J2FUE7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 56.9
  • Coverage: 369.0
  • Bit_score: 372
  • Evalue 4.50e-100
Scaffold2, whole genome shotgun sequence {ECO:0000313|EMBL:KIS33837.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.7
  • Coverage: 366.0
  • Bit_score: 381
  • Evalue 1.00e-102
type IV secretion system protein B10; K03195 type IV secretion system protein VirB10 similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 370.0
  • Bit_score: 354
  • Evalue 4.00e-95

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Taxonomy

Novosphingobium sp. P6W → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1101
ATGTCCGTGTCCTTTCGGGAAAAGACGGCGGGAAGCGATCAGAATGATCAGGATCCGCGCGGGCAGCGAGTCGAGGTCGATCTGGCAACACGGTCTGTCTTGCCCGAGGTTGTTGGCAGAAAGCCAGCCTCTGATGCTGTAGGTGTGGCCGTGGGGGTGCTTGGTGTCGCATTATTGGGTGGAATAACACTATGGGCGATGAGCGGAGCCCGACAGGCGCAGCCAGCGACAGTGGCCGCGCCTGTGACCAGCCCCGCACCTGCGGCATTACCAACGCCCGCGCCGATAACCCCACCGACAGTGCCGCCGCAAGCTATCACCGATGTGCCACCACCCGCGCCACCACCCGCACCAAATCCTGTAGTACAAGGTAGCCCGGCACCTGCTAACCATTACGCATCACCCACCGTCGTTTATGATGCAACAGCGCCATCATCGATTGGTGGTCCTGTTGCTGGCGGCCAAGTGGCATTAGGGCCTGCCGCACCGACGGGGGGGGACGACTTTACCCGCCGGATAGGAGGCGTGGGGGGAGGGCCGGCAACTGCGACTGCCAGCTTCAACCCGACAACAACCATTGCGCAAGGCACGATGATTCCGGCCGTACTGGAAACAGCAATCAATACCGATTTGCCGGGTTATGTGCGCGCTGTAGTGAGCGCCGATATCCGCTCGTTTGACGGAAAAGCGGTACTGGTGCCGAGGTCCTCGCGCTTGGTCGGTGAATATAAGAGCGGATTGCAGGCCGGTCAAAAACGTGCCTATGTTATATGGACAAGGCTGATCCGCCCAGACGGCATTTCTGTCGCCTTGAATTCTCCCGCGGTCACCTTTTCGGGCGAAACAGGTTTGGCCGGTCGAGTGAATTCCCATTTCTTCGAGCGATTTGGTTCGGCGATGCTCCTCTCTGTCGTGGGCAATTTGGGTAATATCATTGGCAACAATTCATCTACCATCGTGCTTGGCGGCGGTCAGTCGGCCGCGGCAGCCGCAATCGGACAGACAGGGCAGATCGCTCCTACGGTAAAGGTCAGACAAGGCTTGCCCATCCGAGTATTCACTGCGCGTGATCTGGATTTTTCTAAGGCACCTTTGCCATGA
PROTEIN sequence
Length: 367
MSVSFREKTAGSDQNDQDPRGQRVEVDLATRSVLPEVVGRKPASDAVGVAVGVLGVALLGGITLWAMSGARQAQPATVAAPVTSPAPAALPTPAPITPPTVPPQAITDVPPPAPPPAPNPVVQGSPAPANHYASPTVVYDATAPSSIGGPVAGGQVALGPAAPTGGDDFTRRIGGVGGGPATATASFNPTTTIAQGTMIPAVLETAINTDLPGYVRAVVSADIRSFDGKAVLVPRSSRLVGEYKSGLQAGQKRAYVIWTRLIRPDGISVALNSPAVTFSGETGLAGRVNSHFFERFGSAMLLSVVGNLGNIIGNNSSTIVLGGGQSAAAAAIGQTGQIAPTVKVRQGLPIRVFTARDLDFSKAPLP*