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SCNpilot_cont_300_bf_scaffold_1185_curated_16

Organism: scnpilot_dereplicated_Novosphingobium_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 14642..15250

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000364CCE8 similarity UNIREF
DB: UNIREF100
  • Identity: 96.5
  • Coverage: 202.0
  • Bit_score: 383
  • Evalue 1.80e-103
Response regulator UhpA {ECO:0000313|EMBL:KHS49403.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 202.0
  • Bit_score: 334
  • Evalue 8.10e-89
two component LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 73.3
  • Coverage: 202.0
  • Bit_score: 293
  • Evalue 6.00e-77

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Taxonomy

Novosphingobium subterraneum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGAACGCTGACCGAGTTGTGCACCTTGTGGATGACGAGGAGGCAATCCGGAAATCAGCCGGCTTTGTGCTCTCCCGAGCCGGATACAAGGTTCATCCCCACAATTCTGGCGTGGAGTTTCTCAAGCAAGCAAGACACGCTCCAATTGGCTGCGTTTTGCTGGACGTGCGGATGCCGGACATGGATGGGCTCGAGGTTCAGCGGGTGATGGCCGAGCGCGGGATCAACATGCCGGTGATCGTTCTGACCGGACATGGTGATGTAACCACGGCTGTGCAGGCCATGAAGGCCGGCGCCGTCGAGTTTCTCGAAAAGCCATTTGAAAAGGCCTCGCTACTCGAAGCATTGGAGCGAGCATTCGGGCGACTGGAGCAGAATGATGCGCGTGAAATTGAAGAGCGGGAAGCCCGCACCAAAATTGCGGCGCTGACGCCGCGCGAACGAGAAATTCTCGAAGGCCTCGCCAAGGGATACCCCAACAAGACTATCGCCTATGACCTTAGGTGCTCGTCGCGCACCGTCGAGGTGCACCGGGCCAGCTTGATGCAGAAACTGGAGGTTCACAGCCTTTCCGACCTTCTGCGAATAGCGATTGCCGCCGGACTGTAG
PROTEIN sequence
Length: 203
MNADRVVHLVDDEEAIRKSAGFVLSRAGYKVHPHNSGVEFLKQARHAPIGCVLLDVRMPDMDGLEVQRVMAERGINMPVIVLTGHGDVTTAVQAMKAGAVEFLEKPFEKASLLEALERAFGRLEQNDAREIEEREARTKIAALTPREREILEGLAKGYPNKTIAYDLRCSSRTVEVHRASLMQKLEVHSLSDLLRIAIAAGL*