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scnpilot_p_inoc_scaffold_181_curated

Search features with annotation key words

Displaying items 1-30 of 118 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_181_curated_1
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2..2845)
DNA (2844bp) protein (948aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0A7_FLAB3
hypothetical protein
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_181_curated_2
GWF2_WWE1X_40_14_curated, WWE1X, Bacteria

Not on your lists

comp(2871..3356)
DNA (486bp) protein (162aa)
Endonuclease I id=3388093 bin=GWF2_WWE1_40_14 species=Flavobacterium columnare genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_WWE1_40_14 organism_group=WWE1
Tax=GWF2_WWE1X_40_14_curated
scnpilot_p_inoc_scaffold_181_curated_3
unknown

Not on your lists

comp(3705..3863)
DNA (159bp) protein (53aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_181_curated_4
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(3860..6370)
DNA (2511bp) protein (837aa)
Outer membrane autotransporter barrel id=4345735 bin=GWF2_Bacteroidetes_43_63 species=Flavobacteria bacterium BAL38 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
scnpilot_p_inoc_scaffold_181_curated_5
Bacteroides reticulotermitis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6519..7283)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:144 RepID=R5YL80_9BACE
Uncharacterized protein {ECO:0000313|EMBL:GAE83042.1}; TaxID=1445607 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides reticulotermitis JCM 10512.;"
hypothetical protein
scnpilot_p_inoc_scaffold_181_curated_6
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7244..8233)
DNA (990bp) protein (330aa)
PhoH family protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1Q3_PALPW
phoh family protein; K06217 phosphate starvation-inducible protein PhoH and related proteins
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_181_curated_7
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8339..9619)
DNA (1281bp) protein (427aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C01.;"
glyA; serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] rbh
Serine hydroxymethyltransferase n=2 Tax=Bacteroides salyersiae RepID=I9SXX4_9BACE
scnpilot_p_inoc_scaffold_181_curated_8
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9708..10319)
DNA (612bp) protein (204aa)
Flavin reductase domain protein FMN-binding protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1P9_PALPW
flavin reductase domain protein fmN-binding protein
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_181_curated_9
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10316..10777)
DNA (462bp) protein (154aa)
Aspartate carbamoyltransferase regulatory chain n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1P8_PALPW
aspartate carbamoyltransferase, regulatory subunit; K00610 aspartate carbamoyltransferase regulatory subunit
Aspartate carbamoyltransferase regulatory chain {ECO:0000256|HAMAP-Rule:MF_00002}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_181_curated_10
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10779..11687)
DNA (909bp) protein (303aa)
aspartate carbamoyltransferase (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
Aspartate carbamoyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1P7_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_181_curated_11
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11736..12341)
DNA (606bp) protein (202aa)
Uncharacterized protein family UPF0029, Impact, N-terminal n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1N4_PALPW
hypothetical protein
Uncharacterized protein family UPF0029, Impact, N-terminal {ECO:0000313|EMBL:ADQ78628.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_181_curated_12
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12447..13397
DNA (951bp) protein (317aa)
Bile acid:sodium symporter n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T092_PALPW
bile acid:sodium symporter; K03453 bile acid:Na+ symporter, BASS family
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_181_curated_13
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13403..14746
DNA (1344bp) protein (448aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T091_PALPW
phospholipid/glycerol acyltransferase
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:ADQ78281.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_181_curated_14
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14866..17586
DNA (2721bp) protein (907aa)
Pyruvate phosphate dikinase {ECO:0000313|EMBL:ADQ78262.1}; EC=2.7.9.1 {ECO:0000313|EMBL:ADQ78262.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
pyruvate phosphate dikinase (EC:2.7.9.1); K01006 pyruvate,orthophosphate dikinase [EC:2.7.9.1]
Pyruvate phosphate dikinase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T072_PALPW
scnpilot_p_inoc_scaffold_181_curated_15
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17820..19016
DNA (1197bp) protein (399aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1D8_PALPW
hypothetical protein; K07133
Uncharacterized protein {ECO:0000313|EMBL:ADQ78532.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_181_curated_16
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19049..22600
DNA (3552bp) protein (1184aa)
pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase [EC:1.2.7.-]
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1D7_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_181_curated_17
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists

22766..24448
DNA (1683bp) protein (561aa)
histidine kinase (EC:2.7.13.3)
Histidine kinase id=4395194 bin=GWC2_ACD39_50_8 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_ACD39_50_8 organism_group=ACD39
Tax=BJP_IG2102_Bacteroidetes_40_9
scnpilot_p_inoc_scaffold_181_curated_18
Bizionia argentinensis, Bizionia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24438..25016)
DNA (579bp) protein (193aa)
Acetyltransferase family protein n=1 Tax=Bizionia argentinensis JUB59 RepID=G2EH09_9FLAO
Acetyltransferase family protein {ECO:0000313|EMBL:EGV42131.1}; TaxID=1046627 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bizionia.;" source="Bizionia argentinensis JUB59.;"
acetyltransferase
scnpilot_p_inoc_scaffold_181_curated_19
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25004..28285)
DNA (3282bp) protein (1094aa)
TPR-domain-containing protein n=1 Tax=Bacteroides coprophilus CAG:333 RepID=R6RZS4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDN55596.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
hypothetical protein
scnpilot_p_inoc_scaffold_181_curated_20
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28298..29683)
DNA (1386bp) protein (462aa)
Sugar-proton symporter {ECO:0000313|EMBL:KDN55595.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
Sugar porter (SP) family MFS transporter id=4354935 bin=GWF2_Bacteroidetes_42_66 species=Tannerella sp. 6_1_58FAA_CT1 genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
major facilitator family transporter
scnpilot_p_inoc_scaffold_181_curated_21
Coprobacter fastidiosus, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29837..30727
DNA (891bp) protein (297aa)
Transcriptional regulator n=1 Tax=Coprobacter fastidiosus NSB1 RepID=U5CDW1_9PORP
Transcriptional regulator {ECO:0000313|EMBL:ERM88193.1}; TaxID=1349822 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter fastidiosus NSB1.;"
transcriptional regulator
scnpilot_p_inoc_scaffold_181_curated_22
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30758..33172
DNA (2415bp) protein (805aa)
Beta-galactosidase {ECO:0000313|EMBL:KDN55597.1}; EC=3.2.1.23 {ECO:0000313|EMBL:KDN55597.1};; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
Uncharacterized protein n=1 Tax=Bacteroides oleiciplenus YIT 12058 RepID=K9EEK4_9BACE
glycoside hydrolase family protein
scnpilot_p_inoc_scaffold_181_curated_23
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(33184..33549)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FJV3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EJF10631.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
hypothetical protein
scnpilot_p_inoc_scaffold_181_curated_24
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33890..37990
DNA (4101bp) protein (1367aa)
one-component system sensor protein (EC:2.7.13.3)
Uncharacterized protein id=1877710 bin=GWE2_Bacteroidetes_40_63 species=Bacteroides salyersiae genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
Tax=GWE2_Bacteroidetes_40_63_curated
scnpilot_p_inoc_scaffold_181_curated_25
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38207..40429
DNA (2223bp) protein (741aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO28924.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
scnpilot_p_inoc_scaffold_181_curated_26
Prevotella dentalis, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40559..44341
DNA (3783bp) protein (1261aa)
Alpha-L-fucosidase n=2 Tax=Prevotella dentalis (strain ATCC 49559 / DSM 3688 / JCM 13448 / NCTC 12043 / ES 2772) RepID=L0JEV5_PREDD
alpha-L-fucosidase
Alpha-L-fucosidase {ECO:0000313|EMBL:AGB29378.1}; TaxID=908937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella dentalis (strain ATCC 49559 / DSM 3688 / JCM 13448 / NCTC; 12043 / ES 2772) (Mitsuokella dentalis).;"
scnpilot_p_inoc_scaffold_181_curated_27
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(44506..45111)
DNA (606bp) protein (202aa)
Hydrolase n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MQU9_9SPHI
Metal dependent phosphohydrolase {ECO:0000313|EMBL:CDT08792.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
metal dependent phosphohydrolase; K07023 putative hydrolases of HD superfamily
scnpilot_p_inoc_scaffold_181_curated_28
unknown

Not on your lists

45317..45514
DNA (198bp) protein (66aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_181_curated_29
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

45515..49009
DNA (3495bp) protein (1165aa)
Alpha-L-rhamnosidase id=1997822 bin=GWD2_Bacteroidetes_40_43 species=Flavobacterium sp. CF136 genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
alpha-L-rhamnosidase
Tax=GWE2_Bacteroidetes_40_63_curated
scnpilot_p_inoc_scaffold_181_curated_30
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

49578..50921
DNA (1344bp) protein (448aa)
hypothetical protein n=1 Tax=SAR406 cluster bacterium SCGC AB-629-J13 RepID=UPI00037F56AD
Uncharacterized protein {ECO:0000313|EMBL:AIZ63718.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
hypothetical protein
Displaying items 1-30 of 118 in total

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