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scnpilot_p_inoc_scaffold_28_curated_51

Organism: scnpilot_dereplicated_Paludibacter_1

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(57313..58176)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 70 subunit, RpoD subfamily n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3A0_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 287.0
  • Bit_score: 519
  • Evalue 2.30e-144
RNA polymerase, sigma 70 subunit, rpod subfamily; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 94.1
  • Coverage: 287.0
  • Bit_score: 519
  • Evalue 7.40e-145
Tax=CG_Paludi_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 288.0
  • Bit_score: 524
  • Evalue 7.80e-146

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Taxonomy

CG_Paludi_01 → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 864
ATGAGACAACTTAAAATTACAAAGTCGATTACCAACAGGGAAAGTGCTTCGCTGGATAAGTATTTGCAAGAAATTGGACGTGAAGATCTTATCACTGTTGAAGAGGAAGTGGAACTGGCGCAGCGAATCCGTAATGGTGATCGTATCGCCTTGGAGAAATTGACCAGAGCCAATCTCAGATTCGTTGTTTCTGTTGCCAAACAATACCAAAACCAGGGCCTCAGTCTGCCCGACCTTATCAACGAAGGGAATTTAGGATTAATTAAAGCGGCGGAAAAGTTTGACGAAACCCGTGGTTTTAAATTTATTTCGTATGCCGTGTGGTGGATTCGTCAGTCGATTCTGCAGGCTCTGGCCGAGCAGTCGCGTATTGTTCGTTTGCCCTTGAATCAGGTGGGTTCGCTCAACAAAATCAACAAAGCGTTTTCAAAGTTCGAACAGGAGAACGAGCGTCGTCCTTCGGCTGAAGAATTAGCCGAACAACTGGATATTCCGGTGGATAAGATTGCCGATACAATGAAGGTGTCGGGTCGCCACATATCGGTAGATGCTCCTTTTGTGGAAGGTGAAGATAATAGTCTGCTCGACGTAATGATCAACGACGATTCGCCGAATGCCGACCGTTCGCTGATGAACGAATCGCTGTCGAAAGAAATTGAACGGGTGCTCGAGAATGCCTTATCGGATCGGGAGCGTGATATTGTAAAGAAATTTTTCGGTCTGGGTGTTCCCGAAATGACCCTGGAAGAAATTGGCGATGAGTTTGGCCTGACCCGCGAACGTGTTCGCCAGATTAAAGAAAAAGCTATCCGTAAATTAAAACCTCATTCAAGAAGTAAATTGCTGAAAAGCTTTTTGGGATAA
PROTEIN sequence
Length: 288
MRQLKITKSITNRESASLDKYLQEIGREDLITVEEEVELAQRIRNGDRIALEKLTRANLRFVVSVAKQYQNQGLSLPDLINEGNLGLIKAAEKFDETRGFKFISYAVWWIRQSILQALAEQSRIVRLPLNQVGSLNKINKAFSKFEQENERRPSAEELAEQLDIPVDKIADTMKVSGRHISVDAPFVEGEDNSLLDVMINDDSPNADRSLMNESLSKEIERVLENALSDRERDIVKKFFGLGVPEMTLEEIGDEFGLTRERVRQIKEKAIRKLKPHSRSKLLKSFLG*