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SCNpilot_cont_1000_bf_scaffold_467_curated

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Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_467_curated_1
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..238
DNA (237bp) protein (79aa)
translation elongation factor Tu, partial n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003665A3E
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
elongation factor Tu; K02358 elongation factor Tu
SCNpilot_cont_1000_bf_scaffold_467_curated_2
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


353..664
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034620FA
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10
SCNpilot_cont_1000_bf_scaffold_467_curated_3
Pandoraea vervacti, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


870..1526
DNA (657bp) protein (219aa)
50S ribosomal protein L3 n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003776C4E
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=656178 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea vervacti.;"
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3
SCNpilot_cont_1000_bf_scaffold_467_curated_4
Pandoraea sputorum, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1529..2149
DNA (621bp) protein (207aa)
50S ribosomal protein L4 n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034BCB24
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;"
LSU ribosomal protein L1E (= L4P); K02926 large subunit ribosomal protein L4
SCNpilot_cont_1000_bf_scaffold_467_curated_5
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2146..2460
DNA (315bp) protein (105aa)
50S ribosomal protein L23 n=1 Tax=Pandoraea sp. B-6 RepID=UPI000346CC1A
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
LSU ribosomal protein L23p (L23Ae)
SCNpilot_cont_1000_bf_scaffold_467_curated_6
Pandoraea vervacti, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2463..3290
DNA (828bp) protein (276aa)
50S ribosomal protein L2 n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034D0D51
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320, ECO:0000313|EMBL:AJP59035.1}; TaxID=656178 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea vervacti.;"
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2
SCNpilot_cont_1000_bf_scaffold_467_curated_7
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3304..3579
DNA (276bp) protein (92aa)
30S ribosomal protein S19 n=3 Tax=Pandoraea RepID=V5UCR8_9BURK
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
30S ribosomal protein S19; K02965 small subunit ribosomal protein S19
SCNpilot_cont_1000_bf_scaffold_467_curated_8
Pandoraea sputorum, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3590..3919
DNA (330bp) protein (110aa)
50S ribosomal protein L22 n=1 Tax=Pandoraea sp. B-6 RepID=UPI000345016C
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;"
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22
SCNpilot_cont_1000_bf_scaffold_467_curated_9
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3929..4735
DNA (807bp) protein (269aa)
30S ribosomal protein S3 n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034A7EFE
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309, ECO:0000313|EMBL:AJE98033.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3
SCNpilot_cont_1000_bf_scaffold_467_curated_10
Pandoraea sputorum, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4738..5154
DNA (417bp) protein (139aa)
50S ribosomal protein L16 n=3 Tax=Pandoraea RepID=V5UDH3_9BURK
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;"
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16
SCNpilot_cont_1000_bf_scaffold_467_curated_11
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5169..5363
DNA (195bp) protein (65aa)
50S ribosomal protein L29 n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034CB967
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374, ECO:0000313|EMBL:AJE98031.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29
SCNpilot_cont_1000_bf_scaffold_467_curated_12
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5360..5632
DNA (273bp) protein (91aa)
30S ribosomal protein S17 n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034C0D07
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17
SCNpilot_cont_1000_bf_scaffold_467_curated_13
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5898..6266
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=3 Tax=Pandoraea RepID=V5UEA1_9BURK
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14
SCNpilot_cont_1000_bf_scaffold_467_curated_14
Pandoraea oxalativorans, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6278..6586
DNA (309bp) protein (103aa)
50S ribosomal protein L24 n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034CDBB8
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativorans.;"
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24
SCNpilot_cont_1000_bf_scaffold_467_curated_15
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6606..7145
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X7J8_9BURK
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5
SCNpilot_cont_1000_bf_scaffold_467_curated_16
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7153..7458
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034A3CB6
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
rpsN; 30S ribosomal protein S14; K02954 small subunit ribosomal protein S14
SCNpilot_cont_1000_bf_scaffold_467_curated_17
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7472..7867
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034A6890
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8
SCNpilot_cont_1000_bf_scaffold_467_curated_18
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7883..8416
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=2 Tax=Pandoraea RepID=V5UE96_9BURK
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6
SCNpilot_cont_1000_bf_scaffold_467_curated_19
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8428..8793
DNA (366bp) protein (122aa)
50S ribosomal protein L18 n=3 Tax=Pandoraea RepID=V5UF20_9BURK
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000313|EMBL:AJE98023.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18
SCNpilot_cont_1000_bf_scaffold_467_curated_20
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8807..9325
DNA (519bp) protein (173aa)
30S ribosomal protein S5 n=3 Tax=Pandoraea RepID=V5UDG4_9BURK
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5
SCNpilot_cont_1000_bf_scaffold_467_curated_21
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9337..9519
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=1 Tax=Pandoraea sp. B-6 RepID=UPI000363C025
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
rpmD; 50S ribosomal protein l30; K02907 large subunit ribosomal protein L30
SCNpilot_cont_1000_bf_scaffold_467_curated_22
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9531..9965
DNA (435bp) protein (145aa)
50S ribosomal protein L15 n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034A417B
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15
SCNpilot_cont_1000_bf_scaffold_467_curated_23
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9989..11326
DNA (1338bp) protein (446aa)
preprotein translocase subunit SecY n=1 Tax=Pandoraea sp. B-6 RepID=UPI000348CB92
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
protein translocase subunit secY; K03076 preprotein translocase subunit SecY
SCNpilot_cont_1000_bf_scaffold_467_curated_24
Pandoraea oxalativorans, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11336..11554
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 1 n=3 Tax=Comamonadaceae RepID=IF11_POLSJ
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativorans.;"
SCNpilot_cont_1000_bf_scaffold_467_curated_25
Pandoraea sputorum, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11574..11690
DNA (117bp) protein (39aa)
50S ribosomal protein L36 n=3 Tax=Pandoraea RepID=V5UM82_9BURK
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;"
LSU ribosomal protein L36P; K02919 large subunit ribosomal protein L36
SCNpilot_cont_1000_bf_scaffold_467_curated_26
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11726..12091
DNA (366bp) protein (122aa)
30S ribosomal protein S13 n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034AF360
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315, ECO:0000313|EMBL:AJE98017.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13
SCNpilot_cont_1000_bf_scaffold_467_curated_27
Pandoraea oxalativorans, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12109..12513
DNA (405bp) protein (135aa)
30S ribosomal protein S11 n=3 Tax=Pandoraea RepID=V5UE00_9BURK
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativorans.;"
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11
SCNpilot_cont_1000_bf_scaffold_467_curated_28
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12666..13289
DNA (624bp) protein (208aa)
30S ribosomal protein S4 n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003486521
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
30S ribosomal protein S4
SCNpilot_cont_1000_bf_scaffold_467_curated_29
Pandoraea oxalativorans, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13395..14372
DNA (978bp) protein (326aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativorans.;"
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
DNA-directed RNA polymerase subunit alpha n=1 Tax=Pandoraea sp. B-6 RepID=UPI000344B6AF
SCNpilot_cont_1000_bf_scaffold_467_curated_30
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


14538..14930
DNA (393bp) protein (131aa)
50S ribosomal protein L17 n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034B916F
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17
Displaying items 1-30 of 100 in total

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