ggKbase home page

SCNpilot_cont_1000_bf_scaffold_1223_curated

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_1223_curated_1
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

128..1909
DNA (1782bp) protein (594aa)
acyl-CoA dehydrogenase oxidoreductase (EC:1.3.99.-)
acyl-CoA dehydrogenase n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034528B9
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EON14167.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
SCNpilot_cont_1000_bf_scaffold_1223_curated_2
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2270..2581)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000348FA01
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
hypothetical protein; K09888 cell division protein ZapA
SCNpilot_cont_1000_bf_scaffold_1223_curated_3
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2578..2889)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034C5343
Uncharacterized protein {ECO:0000313|EMBL:EON14165.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_1223_curated_4
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3462..5417
DNA (1956bp) protein (652aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034658ED
TonB-dependent receptor {ECO:0000313|EMBL:EON14164.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
SCNpilot_cont_1000_bf_scaffold_1223_curated_5
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5445..6440
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034DC5AD
Vitamin B12 ABC transporter membrane protein BtuC {ECO:0000313|EMBL:EON14163.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
transport system permease; K02015 iron complex transport system permease protein
SCNpilot_cont_1000_bf_scaffold_1223_curated_6
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6437..7261
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000362293E
ABC Fe3+-hydroxamate/cobalamin transporter, ATPase subunit {ECO:0000313|EMBL:EON14162.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
ABC transporter related
SCNpilot_cont_1000_bf_scaffold_1223_curated_7
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7354..7998
DNA (645bp) protein (215aa)
btuR; cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase (EC:2.5.1.- 2.5.1.17); K00798 cob(I)alamin adenosyltransferase [EC:2.5.1.17]
cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034955D3
Cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:AJF01343.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
SCNpilot_cont_1000_bf_scaffold_1223_curated_8
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8030..9115
DNA (1086bp) protein (362aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; K00768 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034D7728
SCNpilot_cont_1000_bf_scaffold_1223_curated_9
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9112..9990
DNA (879bp) protein (293aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
cobS; cobalamin synthase; K02233 adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034DC813
SCNpilot_cont_1000_bf_scaffold_1223_curated_10
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9996..10571
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034B7030
Uncharacterized protein {ECO:0000313|EMBL:KHQ94898.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
putative phosphoglycerate mutase
SCNpilot_cont_1000_bf_scaffold_1223_curated_11
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10599..11483)
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000362DDD8
Cobalamin-binding protein {ECO:0000313|EMBL:AJF01340.2}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
ABC Fe3+-hydroxamate/cobalamin transporter, periplasmic ligand binding protein; K02016 iron complex transport system substrate-binding protein
SCNpilot_cont_1000_bf_scaffold_1223_curated_12
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12225..12443)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000347602E
Uncharacterized protein {ECO:0000313|EMBL:AIU28718.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
Displaying 12 items

View Taxonomy