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SCNpilot_cont_1000_bf_scaffold_48_curated_15

Organism: scnpilot_dereplicated_Pandoraea_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(13287..14990)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=1 Tax=Pandoraea sp. B-6 RepID=UPI000346AC6C similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 567.0
  • Bit_score: 1102
  • Evalue 0.0
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 567.0
  • Bit_score: 1088
  • Evalue 0.0
30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 91.4
  • Coverage: 570.0
  • Bit_score: 1022
  • Evalue 4.00e-296

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Taxonomy

Pandoraea sputorum → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1704
ATGTCCGACCTGCAAACCTCGACTAACGAATCATTCGCGGCACTCTTCGAAGAGTCGCTCTCCCGTCAAGACATGCGTGCTGGTGAAGTCATCAGCGCAGAAGTCGTTCGGGTTGACCACAACTTTGTGGTCGTCAACGCCGGGCTCAAGTCCGAAGCGTACATCCCTATCGAAGAATTCCTGAATGATCAGGGCGAGGTCGAAGTTCAGGCCGGCGATTTTGTTTCCGTGGCGATCGACGCCCTGGAAAACGGCTACGGCGACACCGTGCTGTCGCGCGACAAGGCCAAGCGTCTGGCCTCGTGGCTGCAACTGGAAAAGGCCCTCGAATCGGGCGAGCTCGTGACCGGCACGATTACCGGCAAGGTCAAGGGCGGCCTGACCGTCATGGTCAACGGCATCCGCGCATTCCTGCCGGGCTCGCTGGTGGACACGCGTCCGGTCAAGGACACGACCCCGTACGAAGGCAAGACCCTCGAATTCCGTGTGATCAAGCTCGATCGCAAGCGCAACAACGTTGTGCTCTCGCGTCGTGCCGTGATCGAAGCCACCCAGGGTGAAGAGCGCGCCAAGCTGCTCGAGACGCTCAAGGAAGGCGCGATCGTCAAGGGCGTGGTCAAGAACATCACCGACTACGGCGCATTCGTCGACCTCGGCGGTATCGACGGCCTGCTGCACATCACCGACATCGCCTGGCGTCGTGTGCGTCACCCGAGCGAAGTGCTGTCGGTTGGCCAGGAAGTCACCGCCAAGATCCTCAAGTTCGATCAAGAGAAGGGCCGTGTCTCGCTGGGCGTCAAGCAACTCGGCGACGATCCGTGGGAAGGCATTGCTCGCCGCTACCCGCAAGGCACCCGCCTGTTCGGCAAGGTCACCAACATTACCGACTACGGCGCATTCGTCGAAGTGGAATCGGGCATCGAAGGCCTGGTTCACGTGTCGGAAATGGACTGGACCAACAAGAACGTTGCACCGACCAAGGTTGTCCAGCTGGGCGACGAAGTCGAAGTCATGGTGCTCGAGATCGACGAAGACCGTCGTCGTATCAGCCTGGGCATGAAGCAGTGCAAGGCGAACCCGTGGGACGACTTCTCGCGCAACTTCAAGAAGGGCGACAAGATCAAGGGCGGCATCAAGTCGATCACCGACTTCGGCGTGTTCATTGGTCTGCCGGGCGGCATCGATGGCCTGGTTCACCTGTCGGACCTGTCGTGGAGCGAAACCGGCGAAGACGCCGTGCGCAAGTACAAGAAGGGCGACGAAGTCGAAGCCGTGGTTCTGGGCATCGACGTCGAGAAGGAACGCATCTCGTTGGGCATCAAGCAGCTCGAAGGCGATCCGTTCAACTCGTTCGTGGCCATTCACGACAAGGGCTCGATCGTTGACGGTACCATCAAGGCGGTCGACCCGAAGGGTGCCGTCGTGTCGCTGGGTGAAGACGTCGAAGGTTACCTGCGCGCTTCGGAAATTTCGCACGACCGTGTGGAAGATGCCCGCAACGTGCTCAAGGAAGGTGAAGCGGTCAATGCAATGATCGTCAACATCGATCGCAAGTCGCGCAACATCAACCTGTCGATCAAGGCGAAGGATTCGGCTGAACAGCAAGAAGCGATCAGCAAGATGTCGTCGGATAGCTCGGCAGCGAGCGGCACCACGAATCTGGGTGCCCTGCTCAAAGCCAAGCTGGACAGCCAGAATCAGTAA
PROTEIN sequence
Length: 568
MSDLQTSTNESFAALFEESLSRQDMRAGEVISAEVVRVDHNFVVVNAGLKSEAYIPIEEFLNDQGEVEVQAGDFVSVAIDALENGYGDTVLSRDKAKRLASWLQLEKALESGELVTGTITGKVKGGLTVMVNGIRAFLPGSLVDTRPVKDTTPYEGKTLEFRVIKLDRKRNNVVLSRRAVIEATQGEERAKLLETLKEGAIVKGVVKNITDYGAFVDLGGIDGLLHITDIAWRRVRHPSEVLSVGQEVTAKILKFDQEKGRVSLGVKQLGDDPWEGIARRYPQGTRLFGKVTNITDYGAFVEVESGIEGLVHVSEMDWTNKNVAPTKVVQLGDEVEVMVLEIDEDRRRISLGMKQCKANPWDDFSRNFKKGDKIKGGIKSITDFGVFIGLPGGIDGLVHLSDLSWSETGEDAVRKYKKGDEVEAVVLGIDVEKERISLGIKQLEGDPFNSFVAIHDKGSIVDGTIKAVDPKGAVVSLGEDVEGYLRASEISHDRVEDARNVLKEGEAVNAMIVNIDRKSRNINLSIKAKDSAEQQEAISKMSSDSSAASGTTNLGALLKAKLDSQNQ*