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SCNpilot_cont_1000_bf_scaffold_361_curated_11

Organism: scnpilot_dereplicated_Pandoraea_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 11405..12061

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000349A9E0 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 218.0
  • Bit_score: 431
  • Evalue 4.90e-118
TetR family transcriptional regulator {ECO:0000313|EMBL:EON12618.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 218.0
  • Bit_score: 421
  • Evalue 7.10e-115
regulatory protein TetR similarity KEGG
DB: KEGG
  • Identity: 76.6
  • Coverage: 197.0
  • Bit_score: 316
  • Evalue 9.40e-84

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Taxonomy

Pandoraea sp. SD6-2 → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 657
ATGGCACGTACCAAAGCGCCCGATCACGAATCGCAGCGCGAACAGATTCTCGATGTCGCCGCCGAAGCATTCGCACACGCGAGTTATCCGAGCGCCTCGATGTCCGAACTGGCCGCCGCGTGCGGCACGTCGAAGGCCCGGCTGTATCACTATTACGCGAGCAAGGACGCCATCCTGTTCGATCTGCTCGAGCGCTACACCAAGCGCTTGATGCTGATCGTCACCGAGGTCGAGGCGCTCGGCCAACGCCGCGGGCTGTCCGAGCGCGATACGTTCCATGAACTGATCCGCGCCTTTCTCGATGAGTACGAGACGTCGCAGACGCGTCATATTGCACTGCTCAACGACGTGAAGTTTCTCAACGACGAGCAACGGGAGATCGTGCTCAATCGTCAGCGTGACGTGGTCGCGGCGTTTGCCCGTCAACTCTCGCGAGCGTTCCCTGACCGGGTGACCAAGCACAACCAGACGGCACTCACGATGATGCTGTTCGGCATGATCAACTGGACCTTCACATGGCTCAAGCCCGGCGGTCGCATGCGATATCGCGATTTCGCCAACGAGGTGATCGCCGTGCTCGAGCACGGCCTCGTCACCCCGCTGCCGGGCGGGATCGAAGCCGCCATCCCCGCAGCAGCGGCGCCATCGCGCGCTTAG
PROTEIN sequence
Length: 219
MARTKAPDHESQREQILDVAAEAFAHASYPSASMSELAAACGTSKARLYHYYASKDAILFDLLERYTKRLMLIVTEVEALGQRRGLSERDTFHELIRAFLDEYETSQTRHIALLNDVKFLNDEQREIVLNRQRDVVAAFARQLSRAFPDRVTKHNQTALTMMLFGMINWTFTWLKPGGRMRYRDFANEVIAVLEHGLVTPLPGGIEAAIPAAAAPSRA*